Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.43■□□□□ 0.22
Atf6F6VAN0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.43■□□□□ 0.22
Atf6F6VAN0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf6F6VAN0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.42■□□□□ 0.22
Atf6F6VAN0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf6F6VAN0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Gm45328-201ENSMUST00000210942 917 ntBASIC16.41■□□□□ 0.22
Atf6F6VAN0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6F6VAN0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6F6VAN0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atf6F6VAN0 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.39■□□□□ 0.21
Atf6F6VAN0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms