Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Gm13036-201ENSMUST00000117799 748 ntBASIC16.18■□□□□ 0.18
Ccdc149F6V035 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.18■□□□□ 0.18
Ccdc149F6V035 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ccdc149F6V035 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc149F6V035 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc149F6V035 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.17■□□□□ 0.18
Ccdc149F6V035 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc149F6V035 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.16■□□□□ 0.18
Ccdc149F6V035 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc149F6V035 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.15■□□□□ 0.18
Ccdc149F6V035 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.15■□□□□ 0.18
Ccdc149F6V035 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.15■□□□□ 0.18
Ccdc149F6V035 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccdc149F6V035 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms