Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gm28305F6U473 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28305F6U473 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28305F6U473 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28305F6U473 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.82□□□□□ -0.52
Gm28305F6U473 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28305F6U473 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm28305F6U473 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm28305F6U473 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm28305F6U473 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Gm28305F6U473 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Gm28305F6U473 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm28305F6U473 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm28305F6U473 Gm43137-201ENSMUST00000198052 594 ntBASIC11.81□□□□□ -0.52
Gm28305F6U473 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm28305F6U473 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm28305F6U473 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.8□□□□□ -0.52
Gm28305F6U473 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gm28305F6U473 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.8□□□□□ -0.52
Gm28305F6U473 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm28305F6U473 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm28305F6U473 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm28305F6U473 Gm13401-201ENSMUST00000117074 291 ntBASIC11.79□□□□□ -0.52
Gm28305F6U473 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Gm28305F6U473 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms