Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.04□□□□□ -0.16
Dchs1E9PVD3 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Gm45612-201ENSMUST00000211320 160 ntBASIC14.04□□□□□ -0.16
Dchs1E9PVD3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Dchs1E9PVD3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Dchs1E9PVD3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Gm27301-201ENSMUST00000184012 127 ntBASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Dchs1E9PVD3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Mir1895-201ENSMUST00000122615 79 ntBASIC14.02□□□□□ -0.17
Dchs1E9PVD3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.02□□□□□ -0.17
Dchs1E9PVD3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Dchs1E9PVD3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms