Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Syce3B5KM66 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.34■□□□□ 0.53
Syce3B5KM66 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Syce3B5KM66 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Syce3B5KM66 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Syce3B5KM66 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.34■□□□□ 0.53
Syce3B5KM66 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Gm10602-201ENSMUST00000098239 609 ntBASIC18.34■□□□□ 0.53
Syce3B5KM66 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.34■□□□□ 0.53
Syce3B5KM66 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.34■□□□□ 0.53
Syce3B5KM66 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syce3B5KM66 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syce3B5KM66 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syce3B5KM66 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syce3B5KM66 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Syce3B5KM66 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Syce3B5KM66 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syce3B5KM66 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Syce3B5KM66 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.33■□□□□ 0.53
Syce3B5KM66 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.33■□□□□ 0.52
Syce3B5KM66 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.33■□□□□ 0.52
Syce3B5KM66 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.33■□□□□ 0.52
Syce3B5KM66 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.33■□□□□ 0.52
Syce3B5KM66 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Syce3B5KM66 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syce3B5KM66 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.33■□□□□ 0.52
Syce3B5KM66 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syce3B5KM66 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Syce3B5KM66 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syce3B5KM66 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Syce3B5KM66 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.33■□□□□ 0.52
Syce3B5KM66 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syce3B5KM66 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Syce3B5KM66 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syce3B5KM66 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.32■□□□□ 0.52
Syce3B5KM66 Gm10698-201ENSMUST00000182663 604 ntBASIC18.32■□□□□ 0.52
Syce3B5KM66 Gm36967-201ENSMUST00000193814 266 ntBASIC18.32■□□□□ 0.52
Syce3B5KM66 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.32■□□□□ 0.52
Syce3B5KM66 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syce3B5KM66 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Syce3B5KM66 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.31■□□□□ 0.52
Syce3B5KM66 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.31■□□□□ 0.52
Syce3B5KM66 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Syce3B5KM66 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.31■□□□□ 0.52
Syce3B5KM66 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syce3B5KM66 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms