Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Grk6-207ENSMUST00000225925 2769 ntBASIC16.32■□□□□ 0.2
Col4a6B1AVK5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Mir449b-201ENSMUST00000104833 80 ntBASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col4a6B1AVK5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.3■□□□□ 0.2
Col4a6B1AVK5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Gm8318-201ENSMUST00000182954 872 ntBASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Col4a6B1AVK5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Gm25287-201ENSMUST00000103846 110 ntBASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Gm22918-201ENSMUST00000103855 110 ntBASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col4a6B1AVK5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a6B1AVK5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms