Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chd3B1AR17 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chd3B1AR17 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd3B1AR17 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.61■□□□□ 0.09
Chd3B1AR17 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd3B1AR17 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.6■□□□□ 0.09
Chd3B1AR17 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chd3B1AR17 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chd3B1AR17 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Chd3B1AR17 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.6■□□□□ 0.09
Chd3B1AR17 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Chd3B1AR17 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.6■□□□□ 0.09
Chd3B1AR17 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd3B1AR17 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Gm4995-201ENSMUST00000117247 432 ntBASIC15.59■□□□□ 0.09
Chd3B1AR17 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Gm5264-201ENSMUST00000190584 848 ntBASIC15.59■□□□□ 0.09
Chd3B1AR17 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.59■□□□□ 0.09
Chd3B1AR17 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Chd3B1AR17 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.59■□□□□ 0.09
Chd3B1AR17 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.59■□□□□ 0.09
Chd3B1AR17 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.59■□□□□ 0.09
Chd3B1AR17 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd3B1AR17 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.59■□□□□ 0.09
Chd3B1AR17 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Chd3B1AR17 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chd3B1AR17 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chd3B1AR17 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Chd3B1AR17 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.58■□□□□ 0.09
Chd3B1AR17 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Chd3B1AR17 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.58■□□□□ 0.09
Chd3B1AR17 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.58■□□□□ 0.09
Chd3B1AR17 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Chd3B1AR17 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chd3B1AR17 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chd3B1AR17 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chd3B1AR17 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.58■□□□□ 0.08
Chd3B1AR17 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.58■□□□□ 0.08
Chd3B1AR17 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Gm13418-201ENSMUST00000119097 944 ntBASIC15.58■□□□□ 0.08
Chd3B1AR17 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.58■□□□□ 0.08
Chd3B1AR17 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chd3B1AR17 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.57■□□□□ 0.08
Chd3B1AR17 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.57■□□□□ 0.08
Chd3B1AR17 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.57■□□□□ 0.08
Chd3B1AR17 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd3B1AR17 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms