Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm12859-201ENSMUST00000117834 427 ntBASIC12.91□□□□□ -0.34
Chd6A3KFM7 Gm10499-201ENSMUST00000174094 934 ntBASIC12.91□□□□□ -0.34
Chd6A3KFM7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.91□□□□□ -0.34
Chd6A3KFM7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Gm37424-201ENSMUST00000191727 561 ntBASIC12.91□□□□□ -0.34
Chd6A3KFM7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd6A3KFM7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Gm9385-201ENSMUST00000117563 472 ntBASIC12.9□□□□□ -0.34
Chd6A3KFM7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Gm7787-201ENSMUST00000216858 688 ntBASIC12.9□□□□□ -0.34
Chd6A3KFM7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd6A3KFM7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Chd6A3KFM7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Chd6A3KFM7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Chd6A3KFM7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.9□□□□□ -0.35
Chd6A3KFM7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Chd6A3KFM7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chd6A3KFM7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.89□□□□□ -0.35
Chd6A3KFM7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Gm15358-201ENSMUST00000119249 520 ntBASIC12.89□□□□□ -0.35
Chd6A3KFM7 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.89□□□□□ -0.35
Chd6A3KFM7 Gm27680-201ENSMUST00000184192 160 ntBASIC12.89□□□□□ -0.35
Chd6A3KFM7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Gm9063-201ENSMUST00000223299 582 ntBASIC12.89□□□□□ -0.35
Chd6A3KFM7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd6A3KFM7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Gm15782-201ENSMUST00000121073 445 ntBASIC12.88□□□□□ -0.35
Chd6A3KFM7 Gm29541-201ENSMUST00000191351 678 ntBASIC12.88□□□□□ -0.35
Chd6A3KFM7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd6A3KFM7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.87□□□□□ -0.35
Chd6A3KFM7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Gm8062-201ENSMUST00000139696 444 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms