Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.68■□□□□ 0.26
Scn1aA2APX8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.68■□□□□ 0.26
Scn1aA2APX8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn1aA2APX8 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.68■□□□□ 0.26
Scn1aA2APX8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Gm11764-201ENSMUST00000120221 623 ntBASIC16.67■□□□□ 0.26
Scn1aA2APX8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.67■□□□□ 0.26
Scn1aA2APX8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.67■□□□□ 0.26
Scn1aA2APX8 AV026068-213ENSMUST00000223675 1171 ntBASIC16.67■□□□□ 0.26
Scn1aA2APX8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.67■□□□□ 0.26
Scn1aA2APX8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Gm18206-201ENSMUST00000207027 926 ntBASIC16.67■□□□□ 0.26
Scn1aA2APX8 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.67■□□□□ 0.26
Scn1aA2APX8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.67■□□□□ 0.26
Scn1aA2APX8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn1aA2APX8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn1aA2APX8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.65■□□□□ 0.26
Scn1aA2APX8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.65■□□□□ 0.26
Scn1aA2APX8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Gm6443-201ENSMUST00000203599 874 ntBASIC16.65■□□□□ 0.26
Scn1aA2APX8 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.65■□□□□ 0.26
Scn1aA2APX8 Gm15590-201ENSMUST00000078419 552 ntBASIC16.65■□□□□ 0.26
Scn1aA2APX8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn1aA2APX8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Scn1aA2APX8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn1aA2APX8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms