Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Gm16061-201ENSMUST00000122167 857 ntBASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Mir5122-201ENSMUST00000175004 89 ntBASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-1A0N8R0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.86□□□□□ -0.35
Trav12d-1A0N8R0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12d-1A0N8R0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms