Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3854A0A1B0GSS6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Gm3854A0A1B0GSS6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Gm3854A0A1B0GSS6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Gm3854A0A1B0GSS6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Gm3854A0A1B0GSS6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Gm3854A0A1B0GSS6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Gm3854A0A1B0GSS6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Gm3854A0A1B0GSS6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm10175-201ENSMUST00000086013 645 ntBASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Mir8117-201ENSMUST00000184773 107 ntBASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm45167-201ENSMUST00000208007 322 ntBASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm3854A0A1B0GSS6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm26308-201ENSMUST00000157768 69 ntBASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm3854A0A1B0GSS6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms