Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Rprl3-201ENSMUST00000157400 290 ntBASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv30A0A0B4J1P1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Mir3081-201ENSMUST00000175305 84 ntBASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trbv30A0A0B4J1P1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm13312-201ENSMUST00000119631 718 ntBASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm17807-201ENSMUST00000186869 298 ntBASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv30A0A0B4J1P1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms