Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm2559-201ENSMUST00000201323 363 ntBASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv5A0A0B4J1G9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv5A0A0B4J1G9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.9□□□□□ -0.35
Trbv5A0A0B4J1G9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv5A0A0B4J1G9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm13148-201ENSMUST00000118892 745 ntBASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv5A0A0B4J1G9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 BC037039-201ENSMUST00000192003 2205 ntBASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm10849-201ENSMUST00000100397 618 ntBASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms