Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Gm21814-202ENSMUST00000203277 873 ntBASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC053393A0A0B4J1F6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Gm27463-201ENSMUST00000183569 57 ntBASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Gm30025-201ENSMUST00000218555 728 ntBASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC053393A0A0B4J1F6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Gm37055-201ENSMUST00000191866 133 ntBASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 App-207ENSMUST00000227737 2827 ntBASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC053393A0A0B4J1F6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.78□□□□□ -0.36
BC053393A0A0B4J1F6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms