Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm22697-201ENSMUST00000175194 63 ntBASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm18101-201ENSMUST00000215769 548 ntBASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm21559-201ENSMUST00000220638 855 ntBASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm8587-201ENSMUST00000076538 843 ntBASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm6433-201ENSMUST00000118634 875 ntBASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm36967-201ENSMUST00000193814 266 ntBASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.3□□□□□ -0.44
Trav21-dv12A0A075B6C4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms