Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-7A0A075B6B0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm9013-201ENSMUST00000132939 882 ntBASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm6345-202ENSMUST00000180900 204 ntBASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm27000-201ENSMUST00000182943 842 ntBASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-7A0A075B6B0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6d-7A0A075B6B0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm11355-201ENSMUST00000121120 306 ntBASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6d-7A0A075B6B0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-7A0A075B6B0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-7A0A075B6B0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6d-7A0A075B6B0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-7A0A075B6B0 Asic1-205ENSMUST00000228185 1818 ntBASIC12.35□□□□□ -0.43
Trav6d-7A0A075B6B0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-7A0A075B6B0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms