Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav8-1A0A075B641 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav8-1A0A075B641 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Mir2861-201ENSMUST00000175539 82 ntBASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Gm10033-202ENSMUST00000211874 928 ntBASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav8-1A0A075B641 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Gm6365-201ENSMUST00000054711 744 ntBASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav8-1A0A075B641 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms