Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Sybu-209ENSMUST00000228639 4113 ntBASIC12.69□□□□□ -0.38
Trav4-2A0A075B638 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-2A0A075B638 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-2A0A075B638 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms