Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16nA0A075B634 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16nA0A075B634 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 App-207ENSMUST00000227737 2827 ntBASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16nA0A075B634 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Gm15378-201ENSMUST00000121894 207 ntBASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Gm20049-201ENSMUST00000219950 730 ntBASIC12.11□□□□□ -0.47
Trav16nA0A075B634 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16nA0A075B634 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16nA0A075B634 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms