Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm44314-201ENSMUST00000199263 138 ntBASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm44394-201ENSMUST00000199558 138 ntBASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm44484-201ENSMUST00000199873 138 ntBASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm44466-201ENSMUST00000200264 138 ntBASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm44359-201ENSMUST00000200671 138 ntBASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-1A0A075B5Z7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm7862-201ENSMUST00000121461 292 ntBASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.69□□□□□ -0.22
Trav5-1A0A075B5Z7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm18733-201ENSMUST00000173950 856 ntBASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-1A0A075B5Z7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm25990-201ENSMUST00000102440 86 ntBASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms