Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Gm11950-201ENSMUST00000121615 838 ntBASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Gm6257-201ENSMUST00000163864 910 ntBASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav1A0A075B5Z4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav1A0A075B5Z4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.83□□□□□ -0.03
Trav1A0A075B5Z4 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.83□□□□□ -0.03
Trav1A0A075B5Z4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav1A0A075B5Z4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav1A0A075B5Z4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav1A0A075B5Z4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav1A0A075B5Z4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Gm45328-201ENSMUST00000210942 917 ntBASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav1A0A075B5Z4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav1A0A075B5Z4 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms