Protein–RNA interactions for Protein: Q9Y6J3

SMAD5-AS1, SMAD5 antisense gene protein 1, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-AS1Q9Y6J3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SMAD5-AS1Q9Y6J3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
SMAD5-AS1Q9Y6J3 SNORD118-201ENST00000363593 134 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-645P-201ENST00000364649 106 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 SNORD110-201ENST00000408189 75 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR548E-201ENST00000408287 88 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU7-74P-201ENST00000459104 62 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 AC073869.9-201ENST00000641610 120 ntBASIC0.46□□□□□ -2.34
SMAD5-AS1Q9Y6J3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.45□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR216B-201ENST00000390186 82 ntBASIC0.45□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-630P-201ENST00000391258 106 ntBASIC0.45□□□□□ -2.34
SMAD5-AS1Q9Y6J3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.45□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
SMAD5-AS1Q9Y6J3 AC090617.8-201ENST00000623339 167 ntBASIC0.45□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR924-201ENST00000638017 53 ntBASIC0.45□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 SNORA2.1-201ENST00000363089 137 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-590P-201ENST00000365039 107 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR9-2-201ENST00000384838 87 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR92A1-201ENST00000385233 78 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 AC006210.1-201ENST00000424882 111 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR8053-201ENST00000613344 75 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR6739-201ENST00000622461 75 ntBASIC0.44□□□□□ -2.34
SMAD5-AS1Q9Y6J3 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
SMAD5-AS1Q9Y6J3 SNORA33.1-201ENST00000364957 130 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 Y_RNA.340-201ENST00000365330 92 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU4-45P-201ENST00000365469 141 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 SNORA49-201ENST00000386157 136 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR501-201ENST00000390204 84 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-175P-201ENST00000516896 107 ntBASIC0.42□□□□□ -2.34
SMAD5-AS1Q9Y6J3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 SNORA2A-201ENST00000383885 135 ntBASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 RNU6-895P-201ENST00000384125 103 ntBASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR518A1-201ENST00000385068 85 ntBASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 AC098934.3-201ENST00000430450 190 ntBASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.41□□□□□ -2.34
SMAD5-AS1Q9Y6J3 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SNORD44.1-201ENST00000363202 61 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU6-471P-201ENST00000383944 106 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNA5SP193-201ENST00000410353 107 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR4677-201ENST00000584153 80 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR3925-201ENST00000584674 77 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR499B-201ENST00000636498 73 ntBASIC0.4□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNA5SP457-201ENST00000363657 124 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SNORA25.4-201ENST00000363666 124 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR516B1-201ENST00000385211 90 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 AC021146.9-201ENST00000512503 156 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR548AG1-201ENST00000579932 66 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RN7SL660P-201ENST00000614852 299 ntBASIC0.39□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU6-110P-201ENST00000384508 104 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR521-2-201ENST00000384818 87 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SNORA75.1-201ENST00000391130 148 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU6-337P-201ENST00000391243 106 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU7-188P-201ENST00000517063 64 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR8087-201ENST00000612745 78 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 U2.7-201ENST00000619197 100 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 uc_338.10-201ENST00000621872 182 ntBASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.38□□□□□ -2.35
SMAD5-AS1Q9Y6J3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.37□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU6-668P-201ENST00000364180 107 ntBASIC0.37□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
SMAD5-AS1Q9Y6J3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR5706-201ENST00000579841 80 ntBASIC0.37□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR4511-201ENST00000582784 87 ntBASIC0.37□□□□□ -2.35
SMAD5-AS1Q9Y6J3 uc_338.17-201ENST00000619633 179 ntBASIC0.37□□□□□ -2.35
SMAD5-AS1Q9Y6J3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SNORA63.6-201ENST00000364921 119 ntBASIC0.36□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNA5SP299-201ENST00000391203 116 ntBASIC0.36□□□□□ -2.35
SMAD5-AS1Q9Y6J3 AC125388.1-201ENST00000459631 156 ntBASIC0.36□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNA5SP330-201ENST00000517096 96 ntBASIC0.36□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR330-201ENST00000362196 94 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 SNORD114-4-201ENST00000363962 75 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR760-201ENST00000390220 80 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU6-1246P-201ENST00000391064 107 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 AC110620.1-201ENST00000416042 228 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNU7-174P-201ENST00000516248 59 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR548V-201ENST00000584165 80 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 U4.4-201ENST00000620626 117 ntBASIC0.35□□□□□ -2.35
SMAD5-AS1Q9Y6J3 RNA5SP192-201ENST00000364404 120 ntBASIC0.34□□□□□ -2.36
SMAD5-AS1Q9Y6J3 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms