Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MIR7-2-201ENST00000384970 110 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 MIR518A1-201ENST00000385068 85 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 RNU7-129P-201ENST00000516128 62 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 AC022709.1-201ENST00000615967 87 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 MIR6515-201ENST00000619843 57 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 MIR6755-201ENST00000619993 66 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 SNORA2A-201ENST00000383885 135 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 MIR516B1-201ENST00000385211 90 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 MIR548E-201ENST00000408287 88 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 MIR1265-201ENST00000408444 86 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 MTND4LP1-201ENST00000446263 157 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 MIR548V-201ENST00000584165 80 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
PCDH18Q9HCL0 SNORD114-26-201ENST00000363543 72 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 SNORA33.1-201ENST00000364957 130 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 RNU6-945P-201ENST00000383947 107 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 MIR9-2-201ENST00000384838 87 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 AL157398.1-201ENST00000452981 186 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 CYP3A137P-201ENST00000562436 69 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 MIR5706-201ENST00000579841 80 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 MIR499B-201ENST00000636498 73 ntBASIC0.69□□□□□ -2.3
PCDH18Q9HCL0 MIR760-201ENST00000390220 80 ntBASIC0.68□□□□□ -2.3
PCDH18Q9HCL0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
PCDH18Q9HCL0 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
PCDH18Q9HCL0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.67□□□□□ -2.3
PCDH18Q9HCL0 SNORA25.4-201ENST00000363666 124 ntBASIC0.67□□□□□ -2.3
PCDH18Q9HCL0 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
PCDH18Q9HCL0 RPS29P1-201ENST00000465274 159 ntBASIC0.66□□□□□ -2.3
PCDH18Q9HCL0 RNU7-188P-201ENST00000517063 64 ntBASIC0.66□□□□□ -2.3
PCDH18Q9HCL0 MIR6739-201ENST00000622461 75 ntBASIC0.66□□□□□ -2.3
PCDH18Q9HCL0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.65□□□□□ -2.31
PCDH18Q9HCL0 SNORA63.6-201ENST00000364921 119 ntBASIC0.65□□□□□ -2.31
PCDH18Q9HCL0 RNU6-1162P-201ENST00000384443 104 ntBASIC0.65□□□□□ -2.31
PCDH18Q9HCL0 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
PCDH18Q9HCL0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.65□□□□□ -2.31
PCDH18Q9HCL0 MIR501-201ENST00000390204 84 ntBASIC0.64□□□□□ -2.31
PCDH18Q9HCL0 SNORA68.3-201ENST00000515906 83 ntBASIC0.64□□□□□ -2.31
PCDH18Q9HCL0 RNA5SP480-201ENST00000516840 109 ntBASIC0.64□□□□□ -2.31
PCDH18Q9HCL0 MIR103A1-201ENST00000362165 78 ntBASIC0.63□□□□□ -2.31
PCDH18Q9HCL0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
PCDH18Q9HCL0 RNU6-1089P-201ENST00000516473 104 ntBASIC0.63□□□□□ -2.31
PCDH18Q9HCL0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.62□□□□□ -2.31
PCDH18Q9HCL0 MIR521-2-201ENST00000384818 87 ntBASIC0.62□□□□□ -2.31
PCDH18Q9HCL0 MIR4677-201ENST00000584153 80 ntBASIC0.62□□□□□ -2.31
PCDH18Q9HCL0 AC090617.8-201ENST00000623339 167 ntBASIC0.62□□□□□ -2.31
PCDH18Q9HCL0 U6.96-201ENST00000636425 70 ntBASIC0.62□□□□□ -2.31
PCDH18Q9HCL0 SNORD44.1-201ENST00000363202 61 ntBASIC0.61□□□□□ -2.31
PCDH18Q9HCL0 Y_RNA.633-201ENST00000459107 95 ntBASIC0.61□□□□□ -2.31
PCDH18Q9HCL0 AC084368.1-201ENST00000620935 65 ntBASIC0.61□□□□□ -2.31
PCDH18Q9HCL0 MIR630-201ENST00000384957 97 ntBASIC0.6□□□□□ -2.31
PCDH18Q9HCL0 RNA5SP299-201ENST00000391203 116 ntBASIC0.6□□□□□ -2.31
PCDH18Q9HCL0 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
PCDH18Q9HCL0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
PCDH18Q9HCL0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
PCDH18Q9HCL0 MIR20A-201ENST00000362279 71 ntBASIC0.59□□□□□ -2.31
PCDH18Q9HCL0 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
PCDH18Q9HCL0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.59□□□□□ -2.31
PCDH18Q9HCL0 RNA5SP128-201ENST00000365305 116 ntBASIC0.58□□□□□ -2.32
PCDH18Q9HCL0 RNU6-471P-201ENST00000383944 106 ntBASIC0.58□□□□□ -2.32
PCDH18Q9HCL0 MIR3925-201ENST00000584674 77 ntBASIC0.58□□□□□ -2.32
PCDH18Q9HCL0 U7.6-201ENST00000610841 64 ntBASIC0.58□□□□□ -2.32
PCDH18Q9HCL0 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
PCDH18Q9HCL0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 Y_RNA.250-201ENST00000364542 110 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 SNORA15B-2-201ENST00000384058 135 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 SNORA15B-1-201ENST00000384334 135 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 RNU6-175P-201ENST00000516896 107 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 MIR4511-201ENST00000582784 87 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 RN7SL793P-201ENST00000583259 296 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 AC243829.6-201ENST00000612652 106 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 RN7SL660P-201ENST00000614852 299 ntBASIC0.57□□□□□ -2.32
PCDH18Q9HCL0 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 SNORD114-29-201ENST00000364819 70 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 Y_RNA.375-201ENST00000365625 101 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 MIR216A-201ENST00000385063 110 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 AC244090.1-201ENST00000441884 93 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 CYP3A54P-201ENST00000566950 75 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 U2.7-201ENST00000619197 100 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
PCDH18Q9HCL0 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
PCDH18Q9HCL0 RNU6-815P-201ENST00000384080 113 ntBASIC0.55□□□□□ -2.32
PCDH18Q9HCL0 MIR643-201ENST00000385267 97 ntBASIC0.55□□□□□ -2.32
PCDH18Q9HCL0 MIR106A-201ENST00000384870 81 ntBASIC0.54□□□□□ -2.32
PCDH18Q9HCL0 SNORA49-201ENST00000386157 136 ntBASIC0.54□□□□□ -2.32
PCDH18Q9HCL0 MIR548AD-201ENST00000584780 82 ntBASIC0.54□□□□□ -2.32
PCDH18Q9HCL0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.54□□□□□ -2.32
PCDH18Q9HCL0 AC010487.4-201ENST00000637027 61 ntBASIC0.54□□□□□ -2.32
PCDH18Q9HCL0 SNORA75.1-201ENST00000391130 148 ntBASIC0.53□□□□□ -2.32
PCDH18Q9HCL0 RNU6-542P-201ENST00000516405 103 ntBASIC0.53□□□□□ -2.32
PCDH18Q9HCL0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.53□□□□□ -2.32
PCDH18Q9HCL0 RNA5SP192-201ENST00000364404 120 ntBASIC0.52□□□□□ -2.33
PCDH18Q9HCL0 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
PCDH18Q9HCL0 MIR1255B2-201ENST00000408618 67 ntBASIC0.52□□□□□ -2.33
PCDH18Q9HCL0 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
PCDH18Q9HCL0 AC103706.3-201ENST00000636297 85 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms