Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MIR521-2-201ENST00000384818 87 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 MIR573-201ENST00000384964 99 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 AC098934.3-201ENST00000430450 190 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.24□□□□□ -2.21
CNTNAP4Q9C0A0 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
CNTNAP4Q9C0A0 Y_RNA.633-201ENST00000459107 95 ntBASIC1.23□□□□□ -2.21
CNTNAP4Q9C0A0 RNA5SP47-201ENST00000517230 109 ntBASIC1.23□□□□□ -2.21
CNTNAP4Q9C0A0 MIR4460-201ENST00000577862 86 ntBASIC1.23□□□□□ -2.21
CNTNAP4Q9C0A0 AL627230.5-201ENST00000619807 58 ntBASIC1.23□□□□□ -2.21
CNTNAP4Q9C0A0 SNORD18A-201ENST00000363753 72 ntBASIC1.22□□□□□ -2.21
CNTNAP4Q9C0A0 RNU6-302P-201ENST00000365249 107 ntBASIC1.22□□□□□ -2.21
CNTNAP4Q9C0A0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CNTNAP4Q9C0A0 SNORA41B-201ENST00000384785 128 ntBASIC1.22□□□□□ -2.21
CNTNAP4Q9C0A0 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
CNTNAP4Q9C0A0 RNU6-698P-201ENST00000363523 107 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 RNU6-34P-201ENST00000364874 107 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 SNORA33.1-201ENST00000364957 130 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 RNU6-269P-201ENST00000391077 97 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 RNA5SP484-201ENST00000458857 111 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 MIR3678-201ENST00000578455 94 ntBASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CNTNAP4Q9C0A0 Y_RNA.250-201ENST00000364542 110 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 RNU6-716P-201ENST00000365621 103 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 MIR582-201ENST00000365731 98 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 MIR548C-201ENST00000384815 97 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 SNORD113-2-201ENST00000391082 72 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 SNORD124-201ENST00000459577 104 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 RNU6-980P-201ENST00000516925 103 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 MIR3612-201ENST00000579753 87 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 MIR8087-201ENST00000612745 78 ntBASIC1.2□□□□□ -2.22
CNTNAP4Q9C0A0 RNU6-1162P-201ENST00000384443 104 ntBASIC1.19□□□□□ -2.22
CNTNAP4Q9C0A0 RNU6-1246P-201ENST00000391064 107 ntBASIC1.19□□□□□ -2.22
CNTNAP4Q9C0A0 MIR548L-201ENST00000408303 86 ntBASIC1.19□□□□□ -2.22
CNTNAP4Q9C0A0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.19□□□□□ -2.22
CNTNAP4Q9C0A0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.18□□□□□ -2.22
CNTNAP4Q9C0A0 SNORD114-23-201ENST00000363536 72 ntBASIC1.18□□□□□ -2.22
CNTNAP4Q9C0A0 MIR517B-201ENST00000385102 67 ntBASIC1.18□□□□□ -2.22
CNTNAP4Q9C0A0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.18□□□□□ -2.22
CNTNAP4Q9C0A0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.18□□□□□ -2.22
CNTNAP4Q9C0A0 AC010487.4-201ENST00000637027 61 ntBASIC1.18□□□□□ -2.22
CNTNAP4Q9C0A0 RNU6-753P-201ENST00000363926 107 ntBASIC1.17□□□□□ -2.22
CNTNAP4Q9C0A0 Y_RNA.325-201ENST00000365171 122 ntBASIC1.17□□□□□ -2.22
CNTNAP4Q9C0A0 Y_RNA.379-201ENST00000365653 102 ntBASIC1.17□□□□□ -2.22
CNTNAP4Q9C0A0 SNORA8.2-201ENST00000384372 139 ntBASIC1.17□□□□□ -2.22
CNTNAP4Q9C0A0 AC021146.9-201ENST00000512503 156 ntBASIC1.17□□□□□ -2.22
CNTNAP4Q9C0A0 MIR548AE1-201ENST00000583292 70 ntBASIC1.17□□□□□ -2.22
CNTNAP4Q9C0A0 MIR6828-201ENST00000636181 60 ntBASIC1.17□□□□□ -2.22
CNTNAP4Q9C0A0 MIR652-201ENST00000385278 98 ntBASIC1.15□□□□□ -2.22
CNTNAP4Q9C0A0 MIR548E-201ENST00000408287 88 ntBASIC1.15□□□□□ -2.22
CNTNAP4Q9C0A0 AC090617.8-201ENST00000623339 167 ntBASIC1.15□□□□□ -2.22
CNTNAP4Q9C0A0 AL162376.1-201ENST00000624117 175 ntBASIC1.15□□□□□ -2.22
CNTNAP4Q9C0A0 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
CNTNAP4Q9C0A0 SNORD114-4-201ENST00000363962 75 ntBASIC1.15□□□□□ -2.23
CNTNAP4Q9C0A0 RNU6-520P-201ENST00000384717 104 ntBASIC1.15□□□□□ -2.23
CNTNAP4Q9C0A0 MIR4698-201ENST00000577795 80 ntBASIC1.15□□□□□ -2.23
CNTNAP4Q9C0A0 MIR4714-201ENST00000580728 77 ntBASIC1.15□□□□□ -2.23
CNTNAP4Q9C0A0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
CNTNAP4Q9C0A0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
CNTNAP4Q9C0A0 SNORA9.1-201ENST00000362412 131 ntBASIC1.13□□□□□ -2.23
CNTNAP4Q9C0A0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.13□□□□□ -2.23
CNTNAP4Q9C0A0 RNU6-231P-201ENST00000517122 103 ntBASIC1.13□□□□□ -2.23
CNTNAP4Q9C0A0 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.13□□□□□ -2.23
CNTNAP4Q9C0A0 MIR6513-201ENST00000621188 64 ntBASIC1.13□□□□□ -2.23
CNTNAP4Q9C0A0 Y_RNA.246-201ENST00000364495 108 ntBASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 SNORA63.6-201ENST00000364921 119 ntBASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 MIR936-201ENST00000401264 98 ntBASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 MIR1197-201ENST00000408818 88 ntBASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 SNORA40.16-201ENST00000517238 121 ntBASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 MIR548AG1-201ENST00000579932 66 ntBASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 uc_338.10-201ENST00000621872 182 ntBASIC1.12□□□□□ -2.23
CNTNAP4Q9C0A0 MIR18A-201ENST00000362310 71 ntBASIC1.11□□□□□ -2.23
CNTNAP4Q9C0A0 SNORA36.1-201ENST00000363424 132 ntBASIC1.11□□□□□ -2.23
CNTNAP4Q9C0A0 SNORA15B-2-201ENST00000384058 135 ntBASIC1.11□□□□□ -2.23
CNTNAP4Q9C0A0 SNORA15B-1-201ENST00000384334 135 ntBASIC1.11□□□□□ -2.23
CNTNAP4Q9C0A0 MIR330-201ENST00000362196 94 ntBASIC1.1□□□□□ -2.23
CNTNAP4Q9C0A0 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
CNTNAP4Q9C0A0 SNORD99-201ENST00000408612 74 ntBASIC1.1□□□□□ -2.23
CNTNAP4Q9C0A0 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
CNTNAP4Q9C0A0 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.24
CNTNAP4Q9C0A0 MIR4473-201ENST00000583731 91 ntBASIC1.09□□□□□ -2.24
CNTNAP4Q9C0A0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
CNTNAP4Q9C0A0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.08□□□□□ -2.24
CNTNAP4Q9C0A0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.08□□□□□ -2.24
CNTNAP4Q9C0A0 CYP3A54P-201ENST00000566950 75 ntBASIC1.08□□□□□ -2.24
CNTNAP4Q9C0A0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 VTRNA1-3-201ENST00000365645 89 ntBASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 MIR516B1-201ENST00000385211 90 ntBASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 RNA5SP227-201ENST00000516184 113 ntBASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 SNORA70.25-201ENST00000612741 95 ntBASIC1.07□□□□□ -2.24
CNTNAP4Q9C0A0 RNU4-33P-201ENST00000364316 85 ntBASIC1.06□□□□□ -2.24
CNTNAP4Q9C0A0 SNORD116-16-201ENST00000384533 92 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms