Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 MIR582-201ENST00000365731 98 ntBASIC0.74□□□□□ -2.29
USP43Q70EL4 MIR573-201ENST00000384964 99 ntBASIC0.74□□□□□ -2.29
USP43Q70EL4 RNU7-74P-201ENST00000459104 62 ntBASIC0.74□□□□□ -2.29
USP43Q70EL4 RNU7-174P-201ENST00000516248 59 ntBASIC0.74□□□□□ -2.29
USP43Q70EL4 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
USP43Q70EL4 Y_RNA.250-201ENST00000364542 110 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 RNU6-716P-201ENST00000365621 103 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 MIR630-201ENST00000384957 97 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 MIR3612-201ENST00000579753 87 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 AC025627.3-201ENST00000582078 182 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 MIR548AE1-201ENST00000583292 70 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 MIR548V-201ENST00000584165 80 ntBASIC0.73□□□□□ -2.29
USP43Q70EL4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.73□□□□□ -2.29
USP43Q70EL4 MIR652-201ENST00000385278 98 ntBASIC0.72□□□□□ -2.29
USP43Q70EL4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
USP43Q70EL4 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
USP43Q70EL4 SNORA33.1-201ENST00000364957 130 ntBASIC0.71□□□□□ -2.3
USP43Q70EL4 RNU6-1184P-201ENST00000384588 108 ntBASIC0.71□□□□□ -2.3
USP43Q70EL4 RNU1-29P-201ENST00000606574 126 ntBASIC0.71□□□□□ -2.3
USP43Q70EL4 RNU6-698P-201ENST00000363523 107 ntBASIC0.7□□□□□ -2.3
USP43Q70EL4 RNU6-34P-201ENST00000364874 107 ntBASIC0.7□□□□□ -2.3
USP43Q70EL4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
USP43Q70EL4 RNU6-1162P-201ENST00000384443 104 ntBASIC0.7□□□□□ -2.3
USP43Q70EL4 SNORA41B-201ENST00000384785 128 ntBASIC0.7□□□□□ -2.3
USP43Q70EL4 MIR548E-201ENST00000408287 88 ntBASIC0.7□□□□□ -2.3
USP43Q70EL4 AC090617.8-201ENST00000623339 167 ntBASIC0.7□□□□□ -2.3
USP43Q70EL4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
USP43Q70EL4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.69□□□□□ -2.3
USP43Q70EL4 SNORD113-2-201ENST00000391082 72 ntBASIC0.69□□□□□ -2.3
USP43Q70EL4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.69□□□□□ -2.3
USP43Q70EL4 Y_RNA.722-201ENST00000517279 114 ntBASIC0.69□□□□□ -2.3
USP43Q70EL4 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
USP43Q70EL4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.69□□□□□ -2.3
USP43Q70EL4 MIR18A-201ENST00000362310 71 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 SNORD114-4-201ENST00000363962 75 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 Y_RNA.325-201ENST00000365171 122 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 RNU6-936P-201ENST00000384005 107 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 MIR193B-201ENST00000384907 83 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 MIR517B-201ENST00000385102 67 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 RNU6-1246P-201ENST00000391064 107 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 SNORD99-201ENST00000408612 74 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 RNU6-469P-201ENST00000516253 101 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
USP43Q70EL4 RNU6-1312P-201ENST00000362425 108 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 RNU6-302P-201ENST00000365249 107 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 MIR548L-201ENST00000408303 86 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.67□□□□□ -2.3
USP43Q70EL4 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
USP43Q70EL4 MIR7107-201ENST00000611489 80 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 SNORA70.25-201ENST00000612741 95 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
USP43Q70EL4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 HMGN2P22-201ENST00000427588 175 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 AC021146.9-201ENST00000512503 156 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 RNU6-980P-201ENST00000516925 103 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 MIR1273G-201ENST00000577677 100 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 MIR548AG1-201ENST00000579932 66 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
USP43Q70EL4 SNORA63.6-201ENST00000364921 119 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 RNU4-45P-201ENST00000365469 141 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 RNU6-808P-201ENST00000391233 108 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 RNA5SP268-201ENST00000516828 124 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 RNA5SP94-201ENST00000516917 108 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 CYP3A54P-201ENST00000566950 75 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 MIR4752-201ENST00000579672 72 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 MIR548AD-201ENST00000584780 82 ntBASIC0.65□□□□□ -2.31
USP43Q70EL4 MIR516B1-201ENST00000385211 90 ntBASIC0.64□□□□□ -2.31
USP43Q70EL4 SNORD110-201ENST00000408189 75 ntBASIC0.64□□□□□ -2.31
USP43Q70EL4 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
USP43Q70EL4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.64□□□□□ -2.31
USP43Q70EL4 SNORD114-23-201ENST00000363536 72 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 Y_RNA.246-201ENST00000364495 108 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 MIR548C-201ENST00000384815 97 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 RNU6-337P-201ENST00000391243 106 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 AC006210.1-201ENST00000424882 111 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 RNA5SP227-201ENST00000516184 113 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 MIR4473-201ENST00000583731 91 ntBASIC0.63□□□□□ -2.31
USP43Q70EL4 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
USP43Q70EL4 RNU6-520P-201ENST00000384717 104 ntBASIC0.62□□□□□ -2.31
USP43Q70EL4 SNORA49-201ENST00000386157 136 ntBASIC0.62□□□□□ -2.31
USP43Q70EL4 RNU4-88P-201ENST00000411220 86 ntBASIC0.62□□□□□ -2.31
USP43Q70EL4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.62□□□□□ -2.31
USP43Q70EL4 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
USP43Q70EL4 SNORA9.1-201ENST00000362412 131 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 Y_RNA.74-201ENST00000362911 99 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 Y_RNA.282-201ENST00000364793 102 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 MIR519A2-201ENST00000384990 87 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 uc_338.10-201ENST00000621872 182 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 AC010487.4-201ENST00000637027 61 ntBASIC0.61□□□□□ -2.31
USP43Q70EL4 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 326.1 ms