Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.64□□□□□ -2.31
SLC44A4Q53GD3 MIR548AE1-201ENST00000583292 70 ntBASIC0.64□□□□□ -2.31
SLC44A4Q53GD3 MIR3657-201ENST00000584818 117 ntBASIC0.64□□□□□ -2.31
SLC44A4Q53GD3 MIR8087-201ENST00000612745 78 ntBASIC0.64□□□□□ -2.31
SLC44A4Q53GD3 AL691482.2-201ENST00000457453 84 ntBASIC0.63□□□□□ -2.31
SLC44A4Q53GD3 RNU6-274P-201ENST00000459566 107 ntBASIC0.63□□□□□ -2.31
SLC44A4Q53GD3 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
SLC44A4Q53GD3 SNORA70.25-201ENST00000612741 95 ntBASIC0.63□□□□□ -2.31
SLC44A4Q53GD3 MIR6509-201ENST00000614603 85 ntBASIC0.63□□□□□ -2.31
SLC44A4Q53GD3 MIR330-201ENST00000362196 94 ntBASIC0.62□□□□□ -2.31
SLC44A4Q53GD3 MIR582-201ENST00000365731 98 ntBASIC0.62□□□□□ -2.31
SLC44A4Q53GD3 RNU6-630P-201ENST00000391258 106 ntBASIC0.62□□□□□ -2.31
SLC44A4Q53GD3 snoU13.13-201ENST00000458842 104 ntBASIC0.62□□□□□ -2.31
SLC44A4Q53GD3 RNA5SP147-201ENST00000516493 109 ntBASIC0.62□□□□□ -2.31
SLC44A4Q53GD3 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
SLC44A4Q53GD3 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
SLC44A4Q53GD3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.61□□□□□ -2.31
SLC44A4Q53GD3 SNORD110-201ENST00000408189 75 ntBASIC0.61□□□□□ -2.31
SLC44A4Q53GD3 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
SLC44A4Q53GD3 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 RNU6-260P-201ENST00000384092 107 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 SNORA40.8-201ENST00000411034 126 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 AC006210.1-201ENST00000424882 111 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 RNU6-752P-201ENST00000516376 102 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 RNU6-656P-201ENST00000516785 107 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 AC069503.3-201ENST00000618674 145 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
SLC44A4Q53GD3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.59□□□□□ -2.31
SLC44A4Q53GD3 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.31
SLC44A4Q53GD3 SNORA68.3-201ENST00000515906 83 ntBASIC0.59□□□□□ -2.31
SLC44A4Q53GD3 RNA5SP121-201ENST00000516537 101 ntBASIC0.59□□□□□ -2.31
SLC44A4Q53GD3 MIR4473-201ENST00000583731 91 ntBASIC0.59□□□□□ -2.31
SLC44A4Q53GD3 AC073869.9-201ENST00000641610 120 ntBASIC0.59□□□□□ -2.31
SLC44A4Q53GD3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
SLC44A4Q53GD3 RNU6-645P-201ENST00000364649 106 ntBASIC0.58□□□□□ -2.32
SLC44A4Q53GD3 RNU6-471P-201ENST00000383944 106 ntBASIC0.58□□□□□ -2.32
SLC44A4Q53GD3 RNU6-895P-201ENST00000384125 103 ntBASIC0.58□□□□□ -2.32
SLC44A4Q53GD3 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
SLC44A4Q53GD3 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
SLC44A4Q53GD3 MIR652-201ENST00000385278 98 ntBASIC0.58□□□□□ -2.32
SLC44A4Q53GD3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 HMGN2P22-201ENST00000427588 175 ntBASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 AC125388.1-201ENST00000459631 156 ntBASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 MIR8053-201ENST00000613344 75 ntBASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
SLC44A4Q53GD3 RNA5SP257-201ENST00000363023 116 ntBASIC0.56□□□□□ -2.32
SLC44A4Q53GD3 SNORA25.4-201ENST00000363666 124 ntBASIC0.56□□□□□ -2.32
SLC44A4Q53GD3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.56□□□□□ -2.32
SLC44A4Q53GD3 MIR548E-201ENST00000408287 88 ntBASIC0.56□□□□□ -2.32
SLC44A4Q53GD3 AC090617.8-201ENST00000623339 167 ntBASIC0.56□□□□□ -2.32
SLC44A4Q53GD3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.55□□□□□ -2.32
SLC44A4Q53GD3 MIR4511-201ENST00000582784 87 ntBASIC0.55□□□□□ -2.32
SLC44A4Q53GD3 MIR6739-201ENST00000622461 75 ntBASIC0.55□□□□□ -2.32
SLC44A4Q53GD3 SNORA2.1-201ENST00000363089 137 ntBASIC0.54□□□□□ -2.32
SLC44A4Q53GD3 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
SLC44A4Q53GD3 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
SLC44A4Q53GD3 SNORA33.1-201ENST00000364957 130 ntBASIC0.53□□□□□ -2.32
SLC44A4Q53GD3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.53□□□□□ -2.32
SLC44A4Q53GD3 AC110620.1-201ENST00000416042 228 ntBASIC0.53□□□□□ -2.32
SLC44A4Q53GD3 AC243829.6-201ENST00000612652 106 ntBASIC0.53□□□□□ -2.32
SLC44A4Q53GD3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
SLC44A4Q53GD3 SNORA2A-201ENST00000383885 135 ntBASIC0.52□□□□□ -2.33
SLC44A4Q53GD3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.52□□□□□ -2.33
SLC44A4Q53GD3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SLC44A4Q53GD3 SNORA75.1-201ENST00000391130 148 ntBASIC0.52□□□□□ -2.33
SLC44A4Q53GD3 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
SLC44A4Q53GD3 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
SLC44A4Q53GD3 MIR633-201ENST00000384821 98 ntBASIC0.51□□□□□ -2.33
SLC44A4Q53GD3 SNORA49-201ENST00000386157 136 ntBASIC0.51□□□□□ -2.33
SLC44A4Q53GD3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.51□□□□□ -2.33
SLC44A4Q53GD3 MIR5706-201ENST00000579841 80 ntBASIC0.51□□□□□ -2.33
SLC44A4Q53GD3 MIRLET7D-201ENST00000362263 87 ntBASIC0.5□□□□□ -2.33
SLC44A4Q53GD3 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
SLC44A4Q53GD3 RNU6-668P-201ENST00000364180 107 ntBASIC0.5□□□□□ -2.33
SLC44A4Q53GD3 MIR548AG1-201ENST00000579932 66 ntBASIC0.5□□□□□ -2.33
SLC44A4Q53GD3 U2.7-201ENST00000619197 100 ntBASIC0.5□□□□□ -2.33
SLC44A4Q53GD3 uc_338.10-201ENST00000621872 182 ntBASIC0.5□□□□□ -2.33
SLC44A4Q53GD3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.5□□□□□ -2.33
SLC44A4Q53GD3 SNORD114-4-201ENST00000363962 75 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 RNA5SP192-201ENST00000364404 120 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 RNA5SP299-201ENST00000391203 116 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 AC021146.9-201ENST00000512503 156 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 RNU6-175P-201ENST00000516896 107 ntBASIC0.49□□□□□ -2.33
SLC44A4Q53GD3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.48□□□□□ -2.33
SLC44A4Q53GD3 MIR521-2-201ENST00000384818 87 ntBASIC0.48□□□□□ -2.33
SLC44A4Q53GD3 MIR501-201ENST00000390204 84 ntBASIC0.48□□□□□ -2.33
SLC44A4Q53GD3 MIR760-201ENST00000390220 80 ntBASIC0.48□□□□□ -2.33
SLC44A4Q53GD3 RNU6-1246P-201ENST00000391064 107 ntBASIC0.48□□□□□ -2.33
SLC44A4Q53GD3 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
SLC44A4Q53GD3 U4.4-201ENST00000620626 117 ntBASIC0.48□□□□□ -2.33
SLC44A4Q53GD3 RNU6-446P-201ENST00000362827 106 ntBASIC0.47□□□□□ -2.33
SLC44A4Q53GD3 MIR630-201ENST00000384957 97 ntBASIC0.47□□□□□ -2.33
SLC44A4Q53GD3 MIR516B1-201ENST00000385211 90 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms