Protein–RNA interactions for Protein: Q02575

NHLH1, Helix-loop-helix protein 1, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1Q02575 SNORA62.5-201ENST00000516634 120 ntBASIC0.76□□□□□ -2.29
NHLH1Q02575 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.76□□□□□ -2.29
NHLH1Q02575 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
NHLH1Q02575 U6.111-201ENST00000636093 83 ntBASIC0.76□□□□□ -2.29
NHLH1Q02575 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 MIR329-2-201ENST00000385029 84 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
NHLH1Q02575 AC125388.1-201ENST00000459631 156 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 MIR4752-201ENST00000579672 72 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 MIR4473-201ENST00000583731 91 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 MIR3657-201ENST00000584818 117 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 MIR7107-201ENST00000611489 80 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 MIR6828-201ENST00000636181 60 ntBASIC0.75□□□□□ -2.29
NHLH1Q02575 RNU6-260P-201ENST00000384092 107 ntBASIC0.74□□□□□ -2.29
NHLH1Q02575 RNU6-800P-201ENST00000384473 103 ntBASIC0.74□□□□□ -2.29
NHLH1Q02575 RNU6-630P-201ENST00000391258 106 ntBASIC0.74□□□□□ -2.29
NHLH1Q02575 AC006210.1-201ENST00000424882 111 ntBASIC0.74□□□□□ -2.29
NHLH1Q02575 MIR5589-201ENST00000579442 60 ntBASIC0.74□□□□□ -2.29
NHLH1Q02575 AL162376.1-201ENST00000624117 175 ntBASIC0.74□□□□□ -2.29
NHLH1Q02575 RNU6-1216P-201ENST00000362590 107 ntBASIC0.73□□□□□ -2.29
NHLH1Q02575 RNU4-45P-201ENST00000365469 141 ntBASIC0.73□□□□□ -2.29
NHLH1Q02575 MIR5087-201ENST00000635826 76 ntBASIC0.73□□□□□ -2.29
NHLH1Q02575 RNU6-30P-201ENST00000384561 107 ntBASIC0.72□□□□□ -2.29
NHLH1Q02575 SNORD110-201ENST00000408189 75 ntBASIC0.72□□□□□ -2.29
NHLH1Q02575 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
NHLH1Q02575 snoU13.13-201ENST00000458842 104 ntBASIC0.72□□□□□ -2.29
NHLH1Q02575 MIR4514-201ENST00000581410 57 ntBASIC0.72□□□□□ -2.29
NHLH1Q02575 AC069503.3-201ENST00000618674 145 ntBASIC0.72□□□□□ -2.29
NHLH1Q02575 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
NHLH1Q02575 RNA5SP517-201ENST00000364724 117 ntBASIC0.71□□□□□ -2.3
NHLH1Q02575 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
NHLH1Q02575 SNORA25.18-201ENST00000607153 114 ntBASIC0.71□□□□□ -2.3
NHLH1Q02575 SNORA70.25-201ENST00000612741 95 ntBASIC0.71□□□□□ -2.3
NHLH1Q02575 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
NHLH1Q02575 Y_RNA.386-201ENST00000383913 105 ntBASIC0.7□□□□□ -2.3
NHLH1Q02575 SNORD116-24-201ENST00000384549 92 ntBASIC0.7□□□□□ -2.3
NHLH1Q02575 AC005520.4-201ENST00000604337 90 ntBASIC0.7□□□□□ -2.3
NHLH1Q02575 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 SNORD114-4-201ENST00000363962 75 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 Y_RNA.443-201ENST00000384135 111 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 MIR140-201ENST00000385282 100 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 RNA5SP25-201ENST00000410815 110 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 AC069271.1-201ENST00000445577 156 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 MIR4802-201ENST00000581881 80 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 MIR548AE1-201ENST00000583292 70 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 AC073869.9-201ENST00000641610 120 ntBASIC0.69□□□□□ -2.3
NHLH1Q02575 RNU6-668P-201ENST00000364180 107 ntBASIC0.68□□□□□ -2.3
NHLH1Q02575 RNU6-645P-201ENST00000364649 106 ntBASIC0.68□□□□□ -2.3
NHLH1Q02575 Y_RNA.407-201ENST00000383986 113 ntBASIC0.68□□□□□ -2.3
NHLH1Q02575 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
NHLH1Q02575 MIR652-201ENST00000385278 98 ntBASIC0.68□□□□□ -2.3
NHLH1Q02575 MTND4LP1-201ENST00000446263 157 ntBASIC0.68□□□□□ -2.3
NHLH1Q02575 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
NHLH1Q02575 SNORA2.1-201ENST00000363089 137 ntBASIC0.67□□□□□ -2.3
NHLH1Q02575 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
NHLH1Q02575 SNORA40.17-201ENST00000517256 115 ntBASIC0.67□□□□□ -2.3
NHLH1Q02575 SNORA25.4-201ENST00000363666 124 ntBASIC0.66□□□□□ -2.3
NHLH1Q02575 AC023932.2-201ENST00000603176 175 ntBASIC0.66□□□□□ -2.3
NHLH1Q02575 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
NHLH1Q02575 SNORA2A-201ENST00000383885 135 ntBASIC0.65□□□□□ -2.31
NHLH1Q02575 Y_RNA.423-201ENST00000384057 113 ntBASIC0.65□□□□□ -2.31
NHLH1Q02575 MIR548C-201ENST00000384815 97 ntBASIC0.65□□□□□ -2.31
NHLH1Q02575 AC021146.9-201ENST00000512503 156 ntBASIC0.65□□□□□ -2.31
NHLH1Q02575 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
NHLH1Q02575 Z95118.1-201ENST00000421372 247 ntBASIC0.64□□□□□ -2.31
NHLH1Q02575 SCARNA17.3-201ENST00000516381 125 ntBASIC0.64□□□□□ -2.31
NHLH1Q02575 uc_338.10-201ENST00000621872 182 ntBASIC0.64□□□□□ -2.31
NHLH1Q02575 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
NHLH1Q02575 SNORD71-201ENST00000411292 86 ntBASIC0.63□□□□□ -2.31
NHLH1Q02575 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
NHLH1Q02575 MIR582-201ENST00000365731 98 ntBASIC0.62□□□□□ -2.31
NHLH1Q02575 MIR9-2-201ENST00000384838 87 ntBASIC0.62□□□□□ -2.31
NHLH1Q02575 SNORA40.8-201ENST00000411034 126 ntBASIC0.62□□□□□ -2.31
NHLH1Q02575 HMGN2P22-201ENST00000427588 175 ntBASIC0.62□□□□□ -2.31
NHLH1Q02575 RNU6-656P-201ENST00000516785 107 ntBASIC0.62□□□□□ -2.31
NHLH1Q02575 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
NHLH1Q02575 RNU6-1162P-201ENST00000384443 104 ntBASIC0.61□□□□□ -2.31
NHLH1Q02575 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.61□□□□□ -2.31
NHLH1Q02575 MIR548V-201ENST00000584165 80 ntBASIC0.61□□□□□ -2.31
NHLH1Q02575 RNU1-29P-201ENST00000606574 126 ntBASIC0.61□□□□□ -2.31
NHLH1Q02575 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.61□□□□□ -2.31
NHLH1Q02575 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
NHLH1Q02575 RNU6-471P-201ENST00000383944 106 ntBASIC0.6□□□□□ -2.31
NHLH1Q02575 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
NHLH1Q02575 RNU6-1232P-201ENST00000516299 86 ntBASIC0.6□□□□□ -2.31
NHLH1Q02575 MIR5706-201ENST00000579841 80 ntBASIC0.6□□□□□ -2.31
NHLH1Q02575 MIR6739-201ENST00000622461 75 ntBASIC0.6□□□□□ -2.31
NHLH1Q02575 SNORA63.6-201ENST00000364921 119 ntBASIC0.59□□□□□ -2.31
NHLH1Q02575 MIR548E-201ENST00000408287 88 ntBASIC0.59□□□□□ -2.31
NHLH1Q02575 MIR409-201ENST00000362237 79 ntBASIC0.58□□□□□ -2.32
NHLH1Q02575 SNORA33.1-201ENST00000364957 130 ntBASIC0.58□□□□□ -2.32
NHLH1Q02575 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
NHLH1Q02575 RNU6-1089P-201ENST00000516473 104 ntBASIC0.58□□□□□ -2.32
NHLH1Q02575 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.58□□□□□ -2.32
NHLH1Q02575 Y_RNA.250-201ENST00000364542 110 ntBASIC0.57□□□□□ -2.32
NHLH1Q02575 SNORD114-15-201ENST00000364687 72 ntBASIC0.57□□□□□ -2.32
NHLH1Q02575 MIR521-2-201ENST00000384818 87 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 284.9 ms