Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
USP46P62068 MIR140-201ENST00000385282 100 ntBASIC1.29□□□□□ -2.2
USP46P62068 MIR4661-201ENST00000582720 75 ntBASIC1.29□□□□□ -2.2
USP46P62068 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
USP46P62068 ACA64.5-201ENST00000516207 127 ntBASIC1.28□□□□□ -2.2
USP46P62068 MIR6504-201ENST00000613520 61 ntBASIC1.28□□□□□ -2.2
USP46P62068 U4.4-201ENST00000620626 117 ntBASIC1.27□□□□□ -2.21
USP46P62068 MIR5706-201ENST00000579841 80 ntBASIC1.26□□□□□ -2.21
USP46P62068 MIR516B1-201ENST00000385211 90 ntBASIC1.25□□□□□ -2.21
USP46P62068 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
USP46P62068 CYP3A54P-201ENST00000566950 75 ntBASIC1.25□□□□□ -2.21
USP46P62068 RNU1-29P-201ENST00000606574 126 ntBASIC1.25□□□□□ -2.21
USP46P62068 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.24□□□□□ -2.21
USP46P62068 MIR20A-201ENST00000362279 71 ntBASIC1.24□□□□□ -2.21
USP46P62068 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
USP46P62068 RNU6-446P-201ENST00000362827 106 ntBASIC1.23□□□□□ -2.21
USP46P62068 MIR4452-201ENST00000583004 71 ntBASIC1.23□□□□□ -2.21
USP46P62068 AC243829.6-201ENST00000612652 106 ntBASIC1.23□□□□□ -2.21
USP46P62068 Y_RNA.246-201ENST00000364495 108 ntBASIC1.22□□□□□ -2.21
USP46P62068 Y_RNA.423-201ENST00000384057 113 ntBASIC1.22□□□□□ -2.21
USP46P62068 AC244090.1-201ENST00000441884 93 ntBASIC1.22□□□□□ -2.21
USP46P62068 snoU13.18-201ENST00000459483 104 ntBASIC1.22□□□□□ -2.21
USP46P62068 RNU6-229P-201ENST00000516614 102 ntBASIC1.22□□□□□ -2.21
USP46P62068 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
USP46P62068 SNORA2A-201ENST00000383885 135 ntBASIC1.21□□□□□ -2.22
USP46P62068 MIR489-201ENST00000384923 84 ntBASIC1.21□□□□□ -2.22
USP46P62068 SNORD71-201ENST00000411292 86 ntBASIC1.21□□□□□ -2.22
USP46P62068 SNORA9.1-201ENST00000362412 131 ntBASIC1.2□□□□□ -2.22
USP46P62068 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
USP46P62068 MIR608-201ENST00000384820 100 ntBASIC1.2□□□□□ -2.22
USP46P62068 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
USP46P62068 SNORA40.8-201ENST00000411034 126 ntBASIC1.2□□□□□ -2.22
USP46P62068 U7.6-201ENST00000610841 64 ntBASIC1.2□□□□□ -2.22
USP46P62068 AC090617.8-201ENST00000623339 167 ntBASIC1.2□□□□□ -2.22
USP46P62068 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
USP46P62068 Y_RNA.325-201ENST00000365171 122 ntBASIC1.19□□□□□ -2.22
USP46P62068 RNU6-518P-201ENST00000516056 96 ntBASIC1.19□□□□□ -2.22
USP46P62068 SNORD118-201ENST00000363593 134 ntBASIC1.18□□□□□ -2.22
USP46P62068 SNORD114-22-201ENST00000365423 72 ntBASIC1.18□□□□□ -2.22
USP46P62068 AL021921.1-201ENST00000442774 93 ntBASIC1.18□□□□□ -2.22
USP46P62068 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
USP46P62068 SNORD114-29-201ENST00000364819 70 ntBASIC1.17□□□□□ -2.22
USP46P62068 RNU6-1246P-201ENST00000391064 107 ntBASIC1.17□□□□□ -2.22
USP46P62068 MIR1255B2-201ENST00000408618 67 ntBASIC1.16□□□□□ -2.22
USP46P62068 RNU6-1232P-201ENST00000516299 86 ntBASIC1.16□□□□□ -2.22
USP46P62068 RNU4-54P-201ENST00000516428 129 ntBASIC1.16□□□□□ -2.22
USP46P62068 RNU7-188P-201ENST00000517063 64 ntBASIC1.16□□□□□ -2.22
USP46P62068 MIR6767-201ENST00000637302 66 ntBASIC1.16□□□□□ -2.22
USP46P62068 RNU6-42P-201ENST00000384165 107 ntBASIC1.15□□□□□ -2.23
USP46P62068 RNA5SP220-201ENST00000516298 104 ntBASIC1.15□□□□□ -2.23
USP46P62068 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
USP46P62068 MIR6734-201ENST00000621166 68 ntBASIC1.15□□□□□ -2.23
USP46P62068 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USP46P62068 RNU1-93P-201ENST00000364704 169 ntBASIC1.13□□□□□ -2.23
USP46P62068 SNORD2-201ENST00000459163 69 ntBASIC1.13□□□□□ -2.23
USP46P62068 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
USP46P62068 MIR7978-201ENST00000636158 59 ntBASIC1.13□□□□□ -2.23
USP46P62068 SNORD113-4-201ENST00000364802 75 ntBASIC1.12□□□□□ -2.23
USP46P62068 SNORA41B-201ENST00000384785 128 ntBASIC1.12□□□□□ -2.23
USP46P62068 MIR518A1-201ENST00000385068 85 ntBASIC1.12□□□□□ -2.23
USP46P62068 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
USP46P62068 Y_RNA.722-201ENST00000517279 114 ntBASIC1.11□□□□□ -2.23
USP46P62068 AC243829.3-201ENST00000622177 108 ntBASIC1.11□□□□□ -2.23
USP46P62068 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
USP46P62068 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
USP46P62068 AC084368.1-201ENST00000620935 65 ntBASIC1.1□□□□□ -2.23
USP46P62068 MIR519A2-201ENST00000384990 87 ntBASIC1.09□□□□□ -2.23
USP46P62068 MIR760-201ENST00000390220 80 ntBASIC1.09□□□□□ -2.23
USP46P62068 MIR4677-201ENST00000584153 80 ntBASIC1.09□□□□□ -2.23
USP46P62068 AL590095.2-201ENST00000604136 117 ntBASIC1.09□□□□□ -2.23
USP46P62068 RNU6-1312P-201ENST00000362425 108 ntBASIC1.08□□□□□ -2.24
USP46P62068 RNU6-936P-201ENST00000384005 107 ntBASIC1.08□□□□□ -2.24
USP46P62068 RNU6-110P-201ENST00000384508 104 ntBASIC1.08□□□□□ -2.24
USP46P62068 PSMC1P5-201ENST00000512850 177 ntBASIC1.08□□□□□ -2.24
USP46P62068 MIR6773-201ENST00000612812 74 ntBASIC1.08□□□□□ -2.24
USP46P62068 MIR6755-201ENST00000619993 66 ntBASIC1.08□□□□□ -2.24
USP46P62068 MIR527-201ENST00000385244 85 ntBASIC1.07□□□□□ -2.24
USP46P62068 MIR501-201ENST00000390204 84 ntBASIC1.07□□□□□ -2.24
USP46P62068 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
USP46P62068 Y_RNA.74-201ENST00000362911 99 ntBASIC1.06□□□□□ -2.24
USP46P62068 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
USP46P62068 MIR520E-201ENST00000384867 87 ntBASIC1.06□□□□□ -2.24
USP46P62068 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
USP46P62068 RNU7-129P-201ENST00000516128 62 ntBASIC1.06□□□□□ -2.24
USP46P62068 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
USP46P62068 RNU6-1036P-201ENST00000383959 104 ntBASIC1.05□□□□□ -2.24
USP46P62068 RNU6-520P-201ENST00000384717 104 ntBASIC1.05□□□□□ -2.24
USP46P62068 SNORA49-201ENST00000386157 136 ntBASIC1.05□□□□□ -2.24
USP46P62068 RNU6-337P-201ENST00000391243 106 ntBASIC1.05□□□□□ -2.24
USP46P62068 RNU6-175P-201ENST00000516896 107 ntBASIC1.05□□□□□ -2.24
USP46P62068 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
USP46P62068 RNU6-808P-201ENST00000391233 108 ntBASIC1.03□□□□□ -2.24
USP46P62068 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.02□□□□□ -2.25
USP46P62068 AC098934.3-201ENST00000430450 190 ntBASIC1.02□□□□□ -2.25
USP46P62068 RNU7-119P-201ENST00000459279 63 ntBASIC1.02□□□□□ -2.25
USP46P62068 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
USP46P62068 SNORD115-25-201ENST00000362619 82 ntBASIC1.01□□□□□ -2.25
USP46P62068 AC022709.1-201ENST00000615967 87 ntBASIC1.01□□□□□ -2.25
USP46P62068 MIR499B-201ENST00000636498 73 ntBASIC1.01□□□□□ -2.25
USP46P62068 Y_RNA.282-201ENST00000364793 102 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms