Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU6-940P-201ENST00000363433 104 ntBASIC0.96□□□□□ -2.26
ERVFC1P60507 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
ERVFC1P60507 MIR216A-201ENST00000385063 110 ntBASIC0.96□□□□□ -2.26
ERVFC1P60507 MIR5706-201ENST00000579841 80 ntBASIC0.96□□□□□ -2.26
ERVFC1P60507 RNU6-987P-201ENST00000384759 104 ntBASIC0.95□□□□□ -2.26
ERVFC1P60507 AL157398.1-201ENST00000452981 186 ntBASIC0.95□□□□□ -2.26
ERVFC1P60507 MIR548AE1-201ENST00000583292 70 ntBASIC0.95□□□□□ -2.26
ERVFC1P60507 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
ERVFC1P60507 SNORA63.6-201ENST00000364921 119 ntBASIC0.94□□□□□ -2.26
ERVFC1P60507 AC079150.2-201ENST00000443733 78 ntBASIC0.94□□□□□ -2.26
ERVFC1P60507 AC021146.9-201ENST00000512503 156 ntBASIC0.94□□□□□ -2.26
ERVFC1P60507 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
ERVFC1P60507 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
ERVFC1P60507 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
ERVFC1P60507 RNU4-37P-201ENST00000410214 84 ntBASIC0.93□□□□□ -2.26
ERVFC1P60507 RNA5SP222-201ENST00000411039 105 ntBASIC0.93□□□□□ -2.26
ERVFC1P60507 RNA5SP192-201ENST00000364404 120 ntBASIC0.92□□□□□ -2.26
ERVFC1P60507 MIR548E-201ENST00000408287 88 ntBASIC0.92□□□□□ -2.26
ERVFC1P60507 snoU13.13-201ENST00000458842 104 ntBASIC0.92□□□□□ -2.26
ERVFC1P60507 RNU1-29P-201ENST00000606574 126 ntBASIC0.92□□□□□ -2.26
ERVFC1P60507 SNORA70.25-201ENST00000612741 95 ntBASIC0.92□□□□□ -2.26
ERVFC1P60507 uc_338.10-201ENST00000621872 182 ntBASIC0.92□□□□□ -2.26
ERVFC1P60507 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
ERVFC1P60507 MIR4473-201ENST00000583731 91 ntBASIC0.91□□□□□ -2.26
ERVFC1P60507 RNU6-92P-201ENST00000605893 104 ntBASIC0.91□□□□□ -2.26
ERVFC1P60507 U2.7-201ENST00000619197 100 ntBASIC0.91□□□□□ -2.26
ERVFC1P60507 MIR582-201ENST00000365731 98 ntBASIC0.9□□□□□ -2.27
ERVFC1P60507 MIR633-201ENST00000384821 98 ntBASIC0.9□□□□□ -2.27
ERVFC1P60507 HMGN2P22-201ENST00000427588 175 ntBASIC0.9□□□□□ -2.27
ERVFC1P60507 Y_RNA.125-201ENST00000363371 111 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 SNORD118-201ENST00000363593 134 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 RNA5SP517-201ENST00000364724 117 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 SNORA33.1-201ENST00000364957 130 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 RNU7-174P-201ENST00000516248 59 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 RNU6-122P-201ENST00000516818 107 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 MIR466-201ENST00000580653 84 ntBASIC0.89□□□□□ -2.27
ERVFC1P60507 RNU6-698P-201ENST00000363523 107 ntBASIC0.88□□□□□ -2.27
ERVFC1P60507 RNU6-34P-201ENST00000364874 107 ntBASIC0.88□□□□□ -2.27
ERVFC1P60507 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
ERVFC1P60507 MIR193B-201ENST00000384907 83 ntBASIC0.88□□□□□ -2.27
ERVFC1P60507 MIR517B-201ENST00000385102 67 ntBASIC0.88□□□□□ -2.27
ERVFC1P60507 MIR4752-201ENST00000579672 72 ntBASIC0.88□□□□□ -2.27
ERVFC1P60507 RNA5SP457-201ENST00000363657 124 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 RNU6-829P-201ENST00000363700 112 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 AC244090.1-201ENST00000441884 93 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 RNU6-848P-201ENST00000515948 107 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 RNU6-617P-201ENST00000516147 107 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 RNU6-473P-201ENST00000516164 107 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 RNU6-1049P-201ENST00000516414 107 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 MIR548V-201ENST00000584165 80 ntBASIC0.87□□□□□ -2.27
ERVFC1P60507 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
ERVFC1P60507 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
ERVFC1P60507 MIR1273G-201ENST00000577677 100 ntBASIC0.86□□□□□ -2.27
ERVFC1P60507 AL590095.2-201ENST00000604136 117 ntBASIC0.86□□□□□ -2.27
ERVFC1P60507 MIR20A-201ENST00000362279 71 ntBASIC0.85□□□□□ -2.27
ERVFC1P60507 Y_RNA.178-201ENST00000363832 102 ntBASIC0.85□□□□□ -2.27
ERVFC1P60507 RNY1P8-201ENST00000383970 114 ntBASIC0.85□□□□□ -2.27
ERVFC1P60507 SNORD113-2-201ENST00000391082 72 ntBASIC0.85□□□□□ -2.27
ERVFC1P60507 U7.6-201ENST00000610841 64 ntBASIC0.85□□□□□ -2.27
ERVFC1P60507 MIR6513-201ENST00000621188 64 ntBASIC0.85□□□□□ -2.27
ERVFC1P60507 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
ERVFC1P60507 SNORD60.1-201ENST00000362451 73 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 RNU6-1079P-201ENST00000362861 110 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 SNORA36.2-201ENST00000384004 127 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 RNU6-110P-201ENST00000384508 104 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 SNORA40.8-201ENST00000411034 126 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 SNORD2-201ENST00000459163 69 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 MIR3938-201ENST00000582157 103 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
ERVFC1P60507 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.84□□□□□ -2.27
ERVFC1P60507 RNU6-614P-201ENST00000384369 107 ntBASIC0.83□□□□□ -2.28
ERVFC1P60507 MIR548C-201ENST00000384815 97 ntBASIC0.83□□□□□ -2.28
ERVFC1P60507 MIR630-201ENST00000384957 97 ntBASIC0.83□□□□□ -2.28
ERVFC1P60507 MIR516B1-201ENST00000385211 90 ntBASIC0.83□□□□□ -2.28
ERVFC1P60507 U6.59-201ENST00000615686 107 ntBASIC0.83□□□□□ -2.28
ERVFC1P60507 U4.4-201ENST00000620626 117 ntBASIC0.83□□□□□ -2.28
ERVFC1P60507 Y_RNA.236-201ENST00000364427 111 ntBASIC0.82□□□□□ -2.28
ERVFC1P60507 SNORA2A-201ENST00000383885 135 ntBASIC0.82□□□□□ -2.28
ERVFC1P60507 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
ERVFC1P60507 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
ERVFC1P60507 SNORA25.18-201ENST00000607153 114 ntBASIC0.82□□□□□ -2.28
ERVFC1P60507 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
ERVFC1P60507 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
ERVFC1P60507 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
ERVFC1P60507 CYP3A54P-201ENST00000566950 75 ntBASIC0.81□□□□□ -2.28
ERVFC1P60507 AC243829.6-201ENST00000612652 106 ntBASIC0.81□□□□□ -2.28
ERVFC1P60507 Y_RNA.30-201ENST00000362572 97 ntBASIC0.8□□□□□ -2.28
ERVFC1P60507 SNORD114-29-201ENST00000364819 70 ntBASIC0.8□□□□□ -2.28
ERVFC1P60507 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
ERVFC1P60507 SNORA75.1-201ENST00000391130 148 ntBASIC0.8□□□□□ -2.28
ERVFC1P60507 MIR924-201ENST00000638017 53 ntBASIC0.8□□□□□ -2.28
ERVFC1P60507 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
ERVFC1P60507 RNU6-446P-201ENST00000362827 106 ntBASIC0.79□□□□□ -2.28
ERVFC1P60507 Y_RNA.68-201ENST00000362881 102 ntBASIC0.79□□□□□ -2.28
ERVFC1P60507 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
ERVFC1P60507 RNU6-141P-201ENST00000410499 105 ntBASIC0.79□□□□□ -2.28
ERVFC1P60507 SNORD71-201ENST00000411292 86 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 492.6 ms