Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU4-37P-201ENST00000410214 84 ntBASIC1.05□□□□□ -2.24
USP11P51784 U2.7-201ENST00000619197 100 ntBASIC1.05□□□□□ -2.24
USP11P51784 RNU6-829P-201ENST00000363700 112 ntBASIC1.04□□□□□ -2.24
USP11P51784 RNA5SP517-201ENST00000364724 117 ntBASIC1.04□□□□□ -2.24
USP11P51784 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.04□□□□□ -2.24
USP11P51784 HMGN2P22-201ENST00000427588 175 ntBASIC1.04□□□□□ -2.24
USP11P51784 RNA5SP480-201ENST00000516840 109 ntBASIC1.04□□□□□ -2.24
USP11P51784 MIR466-201ENST00000580653 84 ntBASIC1.04□□□□□ -2.24
USP11P51784 MIR548V-201ENST00000584165 80 ntBASIC1.04□□□□□ -2.24
USP11P51784 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
USP11P51784 SNORA75.1-201ENST00000391130 148 ntBASIC1.03□□□□□ -2.24
USP11P51784 AC069271.1-201ENST00000445577 156 ntBASIC1.03□□□□□ -2.24
USP11P51784 RNU6-1079P-201ENST00000362861 110 ntBASIC1.02□□□□□ -2.25
USP11P51784 SNORA63.6-201ENST00000364921 119 ntBASIC1.02□□□□□ -2.25
USP11P51784 SNORA15B-2-201ENST00000384058 135 ntBASIC1.02□□□□□ -2.25
USP11P51784 SNORA15B-1-201ENST00000384334 135 ntBASIC1.02□□□□□ -2.25
USP11P51784 MIR630-201ENST00000384957 97 ntBASIC1.02□□□□□ -2.25
USP11P51784 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
USP11P51784 PVT1_3.1-201ENST00000620853 95 ntBASIC1.02□□□□□ -2.25
USP11P51784 Y_RNA.125-201ENST00000363371 111 ntBASIC1.01□□□□□ -2.25
USP11P51784 MIR548C-201ENST00000384815 97 ntBASIC1.01□□□□□ -2.25
USP11P51784 MIR598-201ENST00000384868 97 ntBASIC1.01□□□□□ -2.25
USP11P51784 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
USP11P51784 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
USP11P51784 RNU6-940P-201ENST00000363433 104 ntBASIC1□□□□□ -2.25
USP11P51784 RNU7-174P-201ENST00000516248 59 ntBASIC1□□□□□ -2.25
USP11P51784 RNU6-92P-201ENST00000605893 104 ntBASIC1□□□□□ -2.25
USP11P51784 RNU6-446P-201ENST00000362827 106 ntBASIC0.99□□□□□ -2.25
USP11P51784 SNORA36.2-201ENST00000384004 127 ntBASIC0.99□□□□□ -2.25
USP11P51784 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
USP11P51784 uc_338.10-201ENST00000621872 182 ntBASIC0.99□□□□□ -2.25
USP11P51784 SNORD114-26-201ENST00000363543 72 ntBASIC0.98□□□□□ -2.25
USP11P51784 SNORA25.18-201ENST00000607153 114 ntBASIC0.98□□□□□ -2.25
USP11P51784 U4.4-201ENST00000620626 117 ntBASIC0.98□□□□□ -2.25
USP11P51784 SNORD60.1-201ENST00000362451 73 ntBASIC0.97□□□□□ -2.25
USP11P51784 Y_RNA.236-201ENST00000364427 111 ntBASIC0.97□□□□□ -2.25
USP11P51784 MIR140-201ENST00000385282 100 ntBASIC0.97□□□□□ -2.25
USP11P51784 RNU6-122P-201ENST00000516818 107 ntBASIC0.97□□□□□ -2.25
USP11P51784 AC090617.8-201ENST00000623339 167 ntBASIC0.97□□□□□ -2.25
USP11P51784 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
USP11P51784 SNORD118-201ENST00000363593 134 ntBASIC0.96□□□□□ -2.26
USP11P51784 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
USP11P51784 MIR608-201ENST00000384820 100 ntBASIC0.96□□□□□ -2.26
USP11P51784 MIR517B-201ENST00000385102 67 ntBASIC0.96□□□□□ -2.26
USP11P51784 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
USP11P51784 RNU6-1232P-201ENST00000516299 86 ntBASIC0.96□□□□□ -2.26
USP11P51784 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
USP11P51784 RNU6-698P-201ENST00000363523 107 ntBASIC0.95□□□□□ -2.26
USP11P51784 RNU6-34P-201ENST00000364874 107 ntBASIC0.95□□□□□ -2.26
USP11P51784 MIR516B1-201ENST00000385211 90 ntBASIC0.95□□□□□ -2.26
USP11P51784 RNU6-351P-201ENST00000516097 100 ntBASIC0.95□□□□□ -2.26
USP11P51784 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
USP11P51784 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
USP11P51784 MIR5706-201ENST00000579841 80 ntBASIC0.95□□□□□ -2.26
USP11P51784 RNU6-614P-201ENST00000384369 107 ntBASIC0.94□□□□□ -2.26
USP11P51784 CYP3A54P-201ENST00000566950 75 ntBASIC0.94□□□□□ -2.26
USP11P51784 U6.59-201ENST00000615686 107 ntBASIC0.94□□□□□ -2.26
USP11P51784 RNA5SP436-201ENST00000516020 115 ntBASIC0.93□□□□□ -2.26
USP11P51784 RNU4-54P-201ENST00000516428 129 ntBASIC0.93□□□□□ -2.26
USP11P51784 MIR3938-201ENST00000582157 103 ntBASIC0.93□□□□□ -2.26
USP11P51784 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
USP11P51784 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
USP11P51784 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
USP11P51784 Y_RNA.325-201ENST00000365171 122 ntBASIC0.9□□□□□ -2.27
USP11P51784 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
USP11P51784 RNU6-1246P-201ENST00000391064 107 ntBASIC0.9□□□□□ -2.27
USP11P51784 SNORD113-2-201ENST00000391082 72 ntBASIC0.9□□□□□ -2.27
USP11P51784 SNORA40.8-201ENST00000411034 126 ntBASIC0.9□□□□□ -2.27
USP11P51784 AC244090.1-201ENST00000441884 93 ntBASIC0.9□□□□□ -2.27
USP11P51784 MIR6779-201ENST00000617283 64 ntBASIC0.9□□□□□ -2.27
USP11P51784 MIR6755-201ENST00000619993 66 ntBASIC0.9□□□□□ -2.27
USP11P51784 U6.96-201ENST00000636425 70 ntBASIC0.9□□□□□ -2.27
USP11P51784 MIR20A-201ENST00000362279 71 ntBASIC0.89□□□□□ -2.27
USP11P51784 SNORD113-4-201ENST00000364802 75 ntBASIC0.89□□□□□ -2.27
USP11P51784 Y_RNA.423-201ENST00000384057 113 ntBASIC0.89□□□□□ -2.27
USP11P51784 AC243829.6-201ENST00000612652 106 ntBASIC0.89□□□□□ -2.27
USP11P51784 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
USP11P51784 SNORA2A-201ENST00000383885 135 ntBASIC0.88□□□□□ -2.27
USP11P51784 SNORA49-201ENST00000386157 136 ntBASIC0.88□□□□□ -2.27
USP11P51784 RNU6-229P-201ENST00000516614 102 ntBASIC0.88□□□□□ -2.27
USP11P51784 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
USP11P51784 Y_RNA.246-201ENST00000364495 108 ntBASIC0.87□□□□□ -2.27
USP11P51784 SNORA41B-201ENST00000384785 128 ntBASIC0.87□□□□□ -2.27
USP11P51784 MIR518A1-201ENST00000385068 85 ntBASIC0.87□□□□□ -2.27
USP11P51784 RNU6-337P-201ENST00000391243 106 ntBASIC0.87□□□□□ -2.27
USP11P51784 RNU6-141P-201ENST00000410499 105 ntBASIC0.87□□□□□ -2.27
USP11P51784 RNU6-175P-201ENST00000516896 107 ntBASIC0.87□□□□□ -2.27
USP11P51784 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
USP11P51784 RNU7-188P-201ENST00000517063 64 ntBASIC0.86□□□□□ -2.27
USP11P51784 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
USP11P51784 SNORA9.1-201ENST00000362412 131 ntBASIC0.85□□□□□ -2.27
USP11P51784 MIR501-201ENST00000390204 84 ntBASIC0.85□□□□□ -2.27
USP11P51784 MIR4677-201ENST00000584153 80 ntBASIC0.85□□□□□ -2.27
USP11P51784 AC243829.3-201ENST00000622177 108 ntBASIC0.85□□□□□ -2.27
USP11P51784 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
USP11P51784 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.84□□□□□ -2.27
USP11P51784 MIR1255B2-201ENST00000408618 67 ntBASIC0.84□□□□□ -2.27
USP11P51784 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
USP11P51784 SNORD114-29-201ENST00000364819 70 ntBASIC0.83□□□□□ -2.28
USP11P51784 MIR519A2-201ENST00000384990 87 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 304.9 ms