Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 U2.7-201ENST00000619197 100 ntBASIC1.24□□□□□ -2.21
GRIN3BO60391 RNU6-716P-201ENST00000365621 103 ntBASIC1.23□□□□□ -2.21
GRIN3BO60391 MIR216B-201ENST00000390186 82 ntBASIC1.23□□□□□ -2.21
GRIN3BO60391 snoU13.13-201ENST00000458842 104 ntBASIC1.23□□□□□ -2.21
GRIN3BO60391 MIR4639-201ENST00000584938 69 ntBASIC1.23□□□□□ -2.21
GRIN3BO60391 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
GRIN3BO60391 MIR330-201ENST00000362196 94 ntBASIC1.22□□□□□ -2.21
GRIN3BO60391 RNU4-38P-201ENST00000364472 129 ntBASIC1.22□□□□□ -2.21
GRIN3BO60391 MIR644A-201ENST00000385262 94 ntBASIC1.22□□□□□ -2.21
GRIN3BO60391 RNU6-469P-201ENST00000516253 101 ntBASIC1.22□□□□□ -2.21
GRIN3BO60391 AC018659.1-201ENST00000551083 169 ntBASIC1.22□□□□□ -2.21
GRIN3BO60391 MIR3612-201ENST00000579753 87 ntBASIC1.22□□□□□ -2.21
GRIN3BO60391 SNORA41B-201ENST00000384785 128 ntBASIC1.21□□□□□ -2.22
GRIN3BO60391 Y_RNA.633-201ENST00000459107 95 ntBASIC1.21□□□□□ -2.22
GRIN3BO60391 MIR521-2-201ENST00000384818 87 ntBASIC1.2□□□□□ -2.22
GRIN3BO60391 RNU6-1246P-201ENST00000391064 107 ntBASIC1.2□□□□□ -2.22
GRIN3BO60391 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.2□□□□□ -2.22
GRIN3BO60391 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
GRIN3BO60391 AC067863.3-201ENST00000624172 122 ntBASIC1.2□□□□□ -2.22
GRIN3BO60391 RNU6-753P-201ENST00000363926 107 ntBASIC1.19□□□□□ -2.22
GRIN3BO60391 RNU6-726P-201ENST00000364680 107 ntBASIC1.19□□□□□ -2.22
GRIN3BO60391 RNU4-45P-201ENST00000365469 141 ntBASIC1.19□□□□□ -2.22
GRIN3BO60391 Y_RNA.379-201ENST00000365653 102 ntBASIC1.19□□□□□ -2.22
GRIN3BO60391 MIR582-201ENST00000365731 98 ntBASIC1.19□□□□□ -2.22
GRIN3BO60391 SNORD28-201ENST00000384706 75 ntBASIC1.19□□□□□ -2.22
GRIN3BO60391 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.19□□□□□ -2.22
GRIN3BO60391 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.19□□□□□ -2.22
GRIN3BO60391 AC244669.1-204ENST00000621564 178 ntBASIC1.19□□□□□ -2.22
GRIN3BO60391 RNU6-698P-201ENST00000363523 107 ntBASIC1.18□□□□□ -2.22
GRIN3BO60391 RNU1-141P-201ENST00000364623 158 ntBASIC1.18□□□□□ -2.22
GRIN3BO60391 RNU6-34P-201ENST00000364874 107 ntBASIC1.18□□□□□ -2.22
GRIN3BO60391 SNORA33.1-201ENST00000364957 130 ntBASIC1.18□□□□□ -2.22
GRIN3BO60391 SNORD113-2-201ENST00000391082 72 ntBASIC1.18□□□□□ -2.22
GRIN3BO60391 SNORD99-201ENST00000408612 74 ntBASIC1.18□□□□□ -2.22
GRIN3BO60391 RNU5B-6P-201ENST00000516765 68 ntBASIC1.18□□□□□ -2.22
GRIN3BO60391 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
GRIN3BO60391 RNU6-302P-201ENST00000365249 107 ntBASIC1.17□□□□□ -2.22
GRIN3BO60391 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.17□□□□□ -2.22
GRIN3BO60391 Y_RNA.325-201ENST00000365171 122 ntBASIC1.16□□□□□ -2.22
GRIN3BO60391 RNU6-269P-201ENST00000391077 97 ntBASIC1.16□□□□□ -2.22
GRIN3BO60391 MIR3678-201ENST00000578455 94 ntBASIC1.16□□□□□ -2.22
GRIN3BO60391 Y_RNA.250-201ENST00000364542 110 ntBASIC1.15□□□□□ -2.23
GRIN3BO60391 RNA5SP484-201ENST00000458857 111 ntBASIC1.15□□□□□ -2.23
GRIN3BO60391 RNA5SP47-201ENST00000517230 109 ntBASIC1.15□□□□□ -2.23
GRIN3BO60391 MIR4460-201ENST00000577862 86 ntBASIC1.15□□□□□ -2.23
GRIN3BO60391 AC011195.1-201ENST00000578177 177 ntBASIC1.15□□□□□ -2.23
GRIN3BO60391 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.15□□□□□ -2.23
GRIN3BO60391 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
GRIN3BO60391 MIR517B-201ENST00000385102 67 ntBASIC1.14□□□□□ -2.23
GRIN3BO60391 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
GRIN3BO60391 MIR1197-201ENST00000408818 88 ntBASIC1.14□□□□□ -2.23
GRIN3BO60391 MIR548AE1-201ENST00000583292 70 ntBASIC1.14□□□□□ -2.23
GRIN3BO60391 AL353765.1-201ENST00000605514 183 ntBASIC1.14□□□□□ -2.23
GRIN3BO60391 AC090617.8-201ENST00000623339 167 ntBASIC1.14□□□□□ -2.23
GRIN3BO60391 MIR18A-201ENST00000362310 71 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 Y_RNA.125-201ENST00000363371 111 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 RNU6-1162P-201ENST00000384443 104 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 RNU6-520P-201ENST00000384717 104 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 MIR548C-201ENST00000384815 97 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 MIR548F3-201ENST00000408509 87 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 AC021146.9-201ENST00000512503 156 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 SNORA40.16-201ENST00000517238 121 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 MIR4698-201ENST00000577795 80 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 MIR548AG1-201ENST00000579932 66 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 MIR6086-201ENST00000638065 55 ntBASIC1.13□□□□□ -2.23
GRIN3BO60391 MIR548E-201ENST00000408287 88 ntBASIC1.12□□□□□ -2.23
GRIN3BO60391 RNU6-231P-201ENST00000517122 103 ntBASIC1.12□□□□□ -2.23
GRIN3BO60391 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.12□□□□□ -2.23
GRIN3BO60391 uc_338.10-201ENST00000621872 182 ntBASIC1.12□□□□□ -2.23
GRIN3BO60391 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
GRIN3BO60391 SCARNA16.5-201ENST00000517114 183 ntBASIC1.11□□□□□ -2.23
GRIN3BO60391 AL162376.1-201ENST00000624117 175 ntBASIC1.11□□□□□ -2.23
GRIN3BO60391 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
GRIN3BO60391 MIR652-201ENST00000385278 98 ntBASIC1.1□□□□□ -2.23
GRIN3BO60391 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
GRIN3BO60391 AC098934.3-201ENST00000430450 190 ntBASIC1.1□□□□□ -2.23
GRIN3BO60391 RNU7-74P-201ENST00000459104 62 ntBASIC1.1□□□□□ -2.23
GRIN3BO60391 MIR6828-201ENST00000636181 60 ntBASIC1.1□□□□□ -2.23
GRIN3BO60391 SNORA9.1-201ENST00000362412 131 ntBASIC1.09□□□□□ -2.23
GRIN3BO60391 SNORA8.2-201ENST00000384372 139 ntBASIC1.09□□□□□ -2.23
GRIN3BO60391 RNA5SP193-201ENST00000410353 107 ntBASIC1.09□□□□□ -2.23
GRIN3BO60391 MIR4711-201ENST00000578274 70 ntBASIC1.09□□□□□ -2.23
GRIN3BO60391 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
GRIN3BO60391 Y_RNA.246-201ENST00000364495 108 ntBASIC1.08□□□□□ -2.24
GRIN3BO60391 SCARNA17.3-201ENST00000516381 125 ntBASIC1.08□□□□□ -2.24
GRIN3BO60391 SNORA36.1-201ENST00000363424 132 ntBASIC1.07□□□□□ -2.24
GRIN3BO60391 SNORA63.6-201ENST00000364921 119 ntBASIC1.07□□□□□ -2.24
GRIN3BO60391 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
GRIN3BO60391 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.07□□□□□ -2.24
GRIN3BO60391 RNU4-33P-201ENST00000364316 85 ntBASIC1.06□□□□□ -2.24
GRIN3BO60391 SNORA15B-2-201ENST00000384058 135 ntBASIC1.06□□□□□ -2.24
GRIN3BO60391 SNORA15B-1-201ENST00000384334 135 ntBASIC1.06□□□□□ -2.24
GRIN3BO60391 RNU6-930P-201ENST00000390938 100 ntBASIC1.06□□□□□ -2.24
GRIN3BO60391 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
GRIN3BO60391 SNORD114-4-201ENST00000363962 75 ntBASIC1.05□□□□□ -2.24
GRIN3BO60391 Y_RNA.282-201ENST00000364793 102 ntBASIC1.05□□□□□ -2.24
GRIN3BO60391 SNORD116-16-201ENST00000384533 92 ntBASIC1.05□□□□□ -2.24
GRIN3BO60391 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
GRIN3BO60391 RNU1-29P-201ENST00000606574 126 ntBASIC1.05□□□□□ -2.24
GRIN3BO60391 MIR6835-201ENST00000621552 64 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms