Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 U2.7-201ENST00000619197 100 ntBASIC1.05□□□□□ -2.24
RFXAPO00287 MIR26B-201ENST00000362251 77 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 MIR521-2-201ENST00000384818 87 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 RNA5SP94-201ENST00000516917 108 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
RFXAPO00287 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 U4.4-201ENST00000620626 117 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 MIR7978-201ENST00000636158 59 ntBASIC1.04□□□□□ -2.24
RFXAPO00287 RNU6-940P-201ENST00000363433 104 ntBASIC1.03□□□□□ -2.24
RFXAPO00287 RNA5SP215-201ENST00000363440 122 ntBASIC1.03□□□□□ -2.24
RFXAPO00287 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
RFXAPO00287 RNU6-1246P-201ENST00000391064 107 ntBASIC1.03□□□□□ -2.24
RFXAPO00287 RNU6-122P-201ENST00000516818 107 ntBASIC1.03□□□□□ -2.24
RFXAPO00287 RNA5SP268-201ENST00000516828 124 ntBASIC1.03□□□□□ -2.24
RFXAPO00287 AC090617.8-201ENST00000623339 167 ntBASIC1.03□□□□□ -2.24
RFXAPO00287 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.03□□□□□ -2.24
RFXAPO00287 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RFXAPO00287 AC006210.1-201ENST00000424882 111 ntBASIC1.02□□□□□ -2.25
RFXAPO00287 Y_RNA.633-201ENST00000459107 95 ntBASIC1.02□□□□□ -2.25
RFXAPO00287 RNU7-174P-201ENST00000516248 59 ntBASIC1.02□□□□□ -2.25
RFXAPO00287 RNU6-92P-201ENST00000605893 104 ntBASIC1.02□□□□□ -2.25
RFXAPO00287 RNU1-29P-201ENST00000606574 126 ntBASIC1.02□□□□□ -2.25
RFXAPO00287 RNA5SP457-201ENST00000363657 124 ntBASIC1.01□□□□□ -2.25
RFXAPO00287 RNU6-1162P-201ENST00000384443 104 ntBASIC1.01□□□□□ -2.25
RFXAPO00287 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
RFXAPO00287 SCARNA17.3-201ENST00000516381 125 ntBASIC1.01□□□□□ -2.25
RFXAPO00287 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
RFXAPO00287 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
RFXAPO00287 Y_RNA.68-201ENST00000362881 102 ntBASIC1□□□□□ -2.25
RFXAPO00287 Y_RNA.125-201ENST00000363371 111 ntBASIC1□□□□□ -2.25
RFXAPO00287 SNORA63.6-201ENST00000364921 119 ntBASIC1□□□□□ -2.25
RFXAPO00287 Y_RNA.407-201ENST00000383986 113 ntBASIC1□□□□□ -2.25
RFXAPO00287 RNA5SP330-201ENST00000517096 96 ntBASIC1□□□□□ -2.25
RFXAPO00287 SNORD110-201ENST00000408189 75 ntBASIC0.99□□□□□ -2.25
RFXAPO00287 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 SNORD114-4-201ENST00000363962 75 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 Y_RNA.250-201ENST00000364542 110 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 SNORD114-24-201ENST00000365029 72 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RFXAPO00287 MIR936-201ENST00000401264 98 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 RNA5SP222-201ENST00000411039 105 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 HMGN2P22-201ENST00000427588 175 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 MIR3938-201ENST00000582157 103 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 MIR6513-201ENST00000621188 64 ntBASIC0.98□□□□□ -2.25
RFXAPO00287 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
RFXAPO00287 AC025627.3-201ENST00000582078 182 ntBASIC0.97□□□□□ -2.25
RFXAPO00287 Y_RNA.325-201ENST00000365171 122 ntBASIC0.96□□□□□ -2.26
RFXAPO00287 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
RFXAPO00287 SNORA41B-201ENST00000384785 128 ntBASIC0.96□□□□□ -2.26
RFXAPO00287 MIR517B-201ENST00000385102 67 ntBASIC0.96□□□□□ -2.26
RFXAPO00287 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
RFXAPO00287 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
RFXAPO00287 RNU6-1312P-201ENST00000362425 108 ntBASIC0.95□□□□□ -2.26
RFXAPO00287 RNU6-698P-201ENST00000363523 107 ntBASIC0.95□□□□□ -2.26
RFXAPO00287 RNU6-34P-201ENST00000364874 107 ntBASIC0.95□□□□□ -2.26
RFXAPO00287 RNU6-939P-201ENST00000384634 107 ntBASIC0.95□□□□□ -2.26
RFXAPO00287 SNORD113-2-201ENST00000391082 72 ntBASIC0.95□□□□□ -2.26
RFXAPO00287 AC069271.1-201ENST00000445577 156 ntBASIC0.95□□□□□ -2.26
RFXAPO00287 SNORA25.18-201ENST00000607153 114 ntBASIC0.95□□□□□ -2.26
RFXAPO00287 SNORA9.1-201ENST00000362412 131 ntBASIC0.94□□□□□ -2.26
RFXAPO00287 SNORD114-23-201ENST00000363536 72 ntBASIC0.94□□□□□ -2.26
RFXAPO00287 RNA5SP517-201ENST00000364724 117 ntBASIC0.94□□□□□ -2.26
RFXAPO00287 RNU6-936P-201ENST00000384005 107 ntBASIC0.94□□□□□ -2.26
RFXAPO00287 MIR618-201ENST00000385287 98 ntBASIC0.94□□□□□ -2.26
RFXAPO00287 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.94□□□□□ -2.26
RFXAPO00287 MIR548AG1-201ENST00000579932 66 ntBASIC0.94□□□□□ -2.26
RFXAPO00287 MIR516B1-201ENST00000385211 90 ntBASIC0.93□□□□□ -2.26
RFXAPO00287 RNU6-1232P-201ENST00000516299 86 ntBASIC0.93□□□□□ -2.26
RFXAPO00287 AL353765.1-201ENST00000605514 183 ntBASIC0.93□□□□□ -2.26
RFXAPO00287 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
RFXAPO00287 MIR924-201ENST00000638017 53 ntBASIC0.93□□□□□ -2.26
RFXAPO00287 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.92□□□□□ -2.26
RFXAPO00287 SNORA25.8-201ENST00000364831 128 ntBASIC0.92□□□□□ -2.26
RFXAPO00287 SNORA15B-2-201ENST00000384058 135 ntBASIC0.92□□□□□ -2.26
RFXAPO00287 SNORA15B-1-201ENST00000384334 135 ntBASIC0.92□□□□□ -2.26
RFXAPO00287 OR2A41P-201ENST00000473586 105 ntBASIC0.92□□□□□ -2.26
RFXAPO00287 SNORA36.2-201ENST00000384004 127 ntBASIC0.91□□□□□ -2.26
RFXAPO00287 RNA5SP193-201ENST00000410353 107 ntBASIC0.91□□□□□ -2.26
RFXAPO00287 CYP3A54P-201ENST00000566950 75 ntBASIC0.91□□□□□ -2.26
RFXAPO00287 MIR548AD-201ENST00000584780 82 ntBASIC0.91□□□□□ -2.26
RFXAPO00287 uc_338.10-201ENST00000621872 182 ntBASIC0.91□□□□□ -2.26
RFXAPO00287 AC010487.4-201ENST00000637027 61 ntBASIC0.91□□□□□ -2.26
RFXAPO00287 Y_RNA.433-201ENST00000384089 102 ntBASIC0.9□□□□□ -2.27
RFXAPO00287 SNORA49-201ENST00000386157 136 ntBASIC0.9□□□□□ -2.27
RFXAPO00287 Y_RNA.246-201ENST00000364495 108 ntBASIC0.89□□□□□ -2.27
RFXAPO00287 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
RFXAPO00287 RNU4-54P-201ENST00000516428 129 ntBASIC0.89□□□□□ -2.27
RFXAPO00287 Y_RNA.722-201ENST00000517279 114 ntBASIC0.89□□□□□ -2.27
RFXAPO00287 U6.96-201ENST00000636425 70 ntBASIC0.89□□□□□ -2.27
RFXAPO00287 RNA5SP257-201ENST00000363023 116 ntBASIC0.88□□□□□ -2.27
RFXAPO00287 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
RFXAPO00287 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.88□□□□□ -2.27
RFXAPO00287 RNU6-518P-201ENST00000516056 96 ntBASIC0.88□□□□□ -2.27
RFXAPO00287 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
RFXAPO00287 RNU6-1184P-201ENST00000384588 108 ntBASIC0.87□□□□□ -2.27
RFXAPO00287 RNU6-337P-201ENST00000391243 106 ntBASIC0.87□□□□□ -2.27
RFXAPO00287 RNA5SP121-201ENST00000516537 101 ntBASIC0.87□□□□□ -2.27
RFXAPO00287 MIR8087-201ENST00000612745 78 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 404.2 ms