Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RNA5SP98-201ENST00000363158 137 ntBASIC-0.17□□□□□ -2.44
TRIM49BA6NDI0 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.17□□□□□ -2.44
TRIM49BA6NDI0 U6.81-201ENST00000612550 106 ntBASIC-0.17□□□□□ -2.44
TRIM49BA6NDI0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.18□□□□□ -2.44
TRIM49BA6NDI0 SNORD49B-201ENST00000365172 72 ntBASIC-0.18□□□□□ -2.44
TRIM49BA6NDI0 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
TRIM49BA6NDI0 RNU6-455P-201ENST00000384681 107 ntBASIC-0.18□□□□□ -2.44
TRIM49BA6NDI0 MIR9-2-201ENST00000384838 87 ntBASIC-0.18□□□□□ -2.44
TRIM49BA6NDI0 uc_338.36-201ENST00000622331 158 ntBASIC-0.18□□□□□ -2.44
TRIM49BA6NDI0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 RNU6-208P-201ENST00000362431 107 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 RNU6-478P-201ENST00000363904 110 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 RNY4P3-201ENST00000365254 95 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 RNU6-675P-201ENST00000384236 104 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 RNU6-35P-201ENST00000384530 107 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 RNA5SP395-201ENST00000516567 118 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 AC140658.3-201ENST00000567603 271 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 AC006160.2-201ENST00000637708 154 ntBASIC-0.19□□□□□ -2.44
TRIM49BA6NDI0 SNORD115-25-201ENST00000362619 82 ntBASIC-0.2□□□□□ -2.44
TRIM49BA6NDI0 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.2□□□□□ -2.44
TRIM49BA6NDI0 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.2□□□□□ -2.44
TRIM49BA6NDI0 RNU7-24P-201ENST00000458867 62 ntBASIC-0.2□□□□□ -2.44
TRIM49BA6NDI0 AC021146.9-201ENST00000512503 156 ntBASIC-0.2□□□□□ -2.44
TRIM49BA6NDI0 MIR6509-201ENST00000614603 85 ntBASIC-0.2□□□□□ -2.44
TRIM49BA6NDI0 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
TRIM49BA6NDI0 MIR494-201ENST00000349529 81 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 RNU6-330P-201ENST00000363015 107 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 SNORA63.6-201ENST00000364921 119 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 SNORD56B-201ENST00000384713 71 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 RNU6-337P-201ENST00000391243 106 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 AC093729.1-201ENST00000513074 128 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 MIR5582-201ENST00000579697 68 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 MIR3657-201ENST00000584818 117 ntBASIC-0.21□□□□□ -2.44
TRIM49BA6NDI0 RNU6-502P-201ENST00000362419 108 ntBASIC-0.22□□□□□ -2.44
TRIM49BA6NDI0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
TRIM49BA6NDI0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
TRIM49BA6NDI0 MIR4802-201ENST00000581881 80 ntBASIC-0.22□□□□□ -2.44
TRIM49BA6NDI0 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.23□□□□□ -2.45
TRIM49BA6NDI0 SNORD77.2-201ENST00000391045 68 ntBASIC-0.23□□□□□ -2.45
TRIM49BA6NDI0 AL445193.1-201ENST00000441183 141 ntBASIC-0.23□□□□□ -2.45
TRIM49BA6NDI0 MIR4636-201ENST00000582271 80 ntBASIC-0.23□□□□□ -2.45
TRIM49BA6NDI0 MIR5704-201ENST00000584029 77 ntBASIC-0.23□□□□□ -2.45
TRIM49BA6NDI0 AC006254.2-201ENST00000603259 279 ntBASIC-0.23□□□□□ -2.45
TRIM49BA6NDI0 AL590491.3-201ENST00000610731 82 ntBASIC-0.23□□□□□ -2.45
TRIM49BA6NDI0 RNU6-624P-201ENST00000363411 107 ntBASIC-0.24□□□□□ -2.45
TRIM49BA6NDI0 RNU6-340P-201ENST00000364005 107 ntBASIC-0.24□□□□□ -2.45
TRIM49BA6NDI0 AL691482.2-201ENST00000457453 84 ntBASIC-0.24□□□□□ -2.45
TRIM49BA6NDI0 MIR6773-201ENST00000612812 74 ntBASIC-0.24□□□□□ -2.45
TRIM49BA6NDI0 SNORD115-37-201ENST00000363768 82 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 SNORD114-4-201ENST00000363962 75 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 SNORA33.1-201ENST00000364957 130 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 RNU6-46P-201ENST00000383860 107 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 RNU6-260P-201ENST00000384092 107 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 RNU6-274P-201ENST00000459566 107 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 MIR5589-201ENST00000579442 60 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 MIR8068-201ENST00000618032 68 ntBASIC-0.25□□□□□ -2.45
TRIM49BA6NDI0 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 AC022137.1-201ENST00000483735 151 ntBASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 MIR5588-201ENST00000581890 63 ntBASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 MIR4484-201ENST00000582855 83 ntBASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRIM49BA6NDI0 RNY1P1-201ENST00000364372 112 ntBASIC-0.27□□□□□ -2.45
TRIM49BA6NDI0 RNU6-294P-201ENST00000364999 102 ntBASIC-0.27□□□□□ -2.45
TRIM49BA6NDI0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
TRIM49BA6NDI0 RNA5SP476-201ENST00000516613 103 ntBASIC-0.27□□□□□ -2.45
TRIM49BA6NDI0 RNU6-979P-201ENST00000383896 107 ntBASIC-0.28□□□□□ -2.45
TRIM49BA6NDI0 MIRLET7B-201ENST00000385140 83 ntBASIC-0.28□□□□□ -2.45
TRIM49BA6NDI0 AC104692.1-201ENST00000472406 90 ntBASIC-0.28□□□□□ -2.45
TRIM49BA6NDI0 AC062037.1-201ENST00000605302 128 ntBASIC-0.28□□□□□ -2.45
TRIM49BA6NDI0 MIR4788-201ENST00000639104 80 ntBASIC-0.28□□□□□ -2.45
TRIM49BA6NDI0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
TRIM49BA6NDI0 RNU6-592P-201ENST00000411333 103 ntBASIC-0.29□□□□□ -2.46
TRIM49BA6NDI0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.29□□□□□ -2.46
TRIM49BA6NDI0 RNU7-55P-201ENST00000459426 62 ntBASIC-0.29□□□□□ -2.46
TRIM49BA6NDI0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.29□□□□□ -2.46
TRIM49BA6NDI0 SNORA2.1-201ENST00000363089 137 ntBASIC-0.3□□□□□ -2.46
TRIM49BA6NDI0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.3□□□□□ -2.46
TRIM49BA6NDI0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.3□□□□□ -2.46
TRIM49BA6NDI0 IGLL4P-201ENST00000614590 133 ntBASIC-0.3□□□□□ -2.46
TRIM49BA6NDI0 MIR664A-201ENST00000626086 82 ntBASIC-0.3□□□□□ -2.46
TRIM49BA6NDI0 U6.96-201ENST00000636425 70 ntBASIC-0.3□□□□□ -2.46
TRIM49BA6NDI0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.31□□□□□ -2.46
TRIM49BA6NDI0 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.31□□□□□ -2.46
TRIM49BA6NDI0 RNU6-900P-201ENST00000384498 102 ntBASIC-0.31□□□□□ -2.46
TRIM49BA6NDI0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
TRIM49BA6NDI0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRIM49BA6NDI0 YWHAEP3-201ENST00000582767 121 ntBASIC-0.31□□□□□ -2.46
TRIM49BA6NDI0 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.32□□□□□ -2.46
TRIM49BA6NDI0 RNU6-129P-201ENST00000391022 107 ntBASIC-0.32□□□□□ -2.46
TRIM49BA6NDI0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.32□□□□□ -2.46
TRIM49BA6NDI0 RNA5SP170-201ENST00000517150 101 ntBASIC-0.32□□□□□ -2.46
TRIM49BA6NDI0 MIR4280-201ENST00000582178 76 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms