Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-151P-201ENST00000364158 107 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 RNA5SP292-201ENST00000390974 118 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 SNORA26.4-201ENST00000391188 123 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 MIR889-201ENST00000401280 79 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 RNU2-51P-201ENST00000410708 197 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 MIR5591-201ENST00000578248 65 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 MIR3613-201ENST00000579844 87 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 AP001340.1-201ENST00000624405 217 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 MIR4320-201ENST00000636981 65 ntBASIC-1.47□□□□□ -2.64
HHLA3Q9XRX5 SNORD115-33-201ENST00000363723 82 ntBASIC-1.48□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.48□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.48□□□□□ -2.65
HHLA3Q9XRX5 RNU6-644P-201ENST00000391155 98 ntBASIC-1.48□□□□□ -2.65
HHLA3Q9XRX5 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.48□□□□□ -2.65
HHLA3Q9XRX5 CYP3A54P-201ENST00000566950 75 ntBASIC-1.48□□□□□ -2.65
HHLA3Q9XRX5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.48□□□□□ -2.65
HHLA3Q9XRX5 SNORA20.1-201ENST00000364790 130 ntBASIC-1.49□□□□□ -2.65
HHLA3Q9XRX5 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.49□□□□□ -2.65
HHLA3Q9XRX5 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.49□□□□□ -2.65
HHLA3Q9XRX5 MIR203A-201ENST00000384836 110 ntBASIC-1.49□□□□□ -2.65
HHLA3Q9XRX5 RNU4-61P-201ENST00000411243 107 ntBASIC-1.49□□□□□ -2.65
HHLA3Q9XRX5 RNU6-62P-201ENST00000516526 102 ntBASIC-1.49□□□□□ -2.65
HHLA3Q9XRX5 AC006254.2-201ENST00000603259 279 ntBASIC-1.49□□□□□ -2.65
HHLA3Q9XRX5 RNY3P2-201ENST00000362918 102 ntBASIC-1.5□□□□□ -2.65
HHLA3Q9XRX5 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.5□□□□□ -2.65
HHLA3Q9XRX5 MIR4770-201ENST00000579149 58 ntBASIC-1.5□□□□□ -2.65
HHLA3Q9XRX5 MIR548Z-201ENST00000584743 97 ntBASIC-1.5□□□□□ -2.65
HHLA3Q9XRX5 AC103810.7-201ENST00000607821 91 ntBASIC-1.5□□□□□ -2.65
HHLA3Q9XRX5 AC025166.1-201ENST00000612411 163 ntBASIC-1.5□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.5□□□□□ -2.65
HHLA3Q9XRX5 RNA5SP26-201ENST00000362406 119 ntBASIC-1.51□□□□□ -2.65
HHLA3Q9XRX5 SNORA2.1-201ENST00000363089 137 ntBASIC-1.51□□□□□ -2.65
HHLA3Q9XRX5 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.51□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.51□□□□□ -2.65
HHLA3Q9XRX5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
HHLA3Q9XRX5 MIR4439-201ENST00000583746 80 ntBASIC-1.51□□□□□ -2.65
HHLA3Q9XRX5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.51□□□□□ -2.65
HHLA3Q9XRX5 RNU6-824P-201ENST00000363724 104 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 SNORD115-22-201ENST00000364456 82 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 SNORD58C-201ENST00000365223 64 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 MIR513C-201ENST00000401352 84 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 SNORA18.5-201ENST00000516616 101 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 MIR3657-201ENST00000584818 117 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 AC008737.2-201ENST00000599446 118 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 AC062037.2-201ENST00000610137 73 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 MIR6509-201ENST00000614603 85 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 MIR6502-201ENST00000617296 76 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 MIR4773-1-201ENST00000637203 78 ntBASIC-1.52□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 RNU6-813P-201ENST00000384691 107 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 MTATP6P29-201ENST00000415057 132 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 MIR4520-1-201ENST00000582609 70 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 MIR6129-201ENST00000616087 109 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 AL035470.1-201ENST00000622571 220 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 AC091912.2-201ENST00000624798 167 ntBASIC-1.53□□□□□ -2.65
HHLA3Q9XRX5 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.54□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.54□□□□□ -2.66
HHLA3Q9XRX5 MIR548I1-201ENST00000408810 149 ntBASIC-1.54□□□□□ -2.66
HHLA3Q9XRX5 RNU6-519P-201ENST00000410590 108 ntBASIC-1.54□□□□□ -2.66
HHLA3Q9XRX5 RNU6-861P-201ENST00000516745 106 ntBASIC-1.54□□□□□ -2.66
HHLA3Q9XRX5 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.55□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.55□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.55□□□□□ -2.66
HHLA3Q9XRX5 MIR568-201ENST00000385036 95 ntBASIC-1.55□□□□□ -2.66
HHLA3Q9XRX5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.55□□□□□ -2.66
HHLA3Q9XRX5 U7.2-201ENST00000607576 63 ntBASIC-1.55□□□□□ -2.66
HHLA3Q9XRX5 MIR6874-201ENST00000635894 71 ntBASIC-1.55□□□□□ -2.66
HHLA3Q9XRX5 SNORD45B-201ENST00000364617 72 ntBASIC-1.56□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.56□□□□□ -2.66
HHLA3Q9XRX5 MIR606-201ENST00000384851 96 ntBASIC-1.56□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.56□□□□□ -2.66
HHLA3Q9XRX5 MTCYBP9-201ENST00000431021 303 ntBASIC-1.56□□□□□ -2.66
HHLA3Q9XRX5 RNU7-154P-201ENST00000516194 62 ntBASIC-1.56□□□□□ -2.66
HHLA3Q9XRX5 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.56□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.57□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.57□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.57□□□□□ -2.66
HHLA3Q9XRX5 MIR4679-2-201ENST00000578358 77 ntBASIC-1.57□□□□□ -2.66
HHLA3Q9XRX5 RNU6-682P-201ENST00000363843 106 ntBASIC-1.58□□□□□ -2.66
HHLA3Q9XRX5 RNU6-164P-201ENST00000364604 103 ntBASIC-1.58□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.58□□□□□ -2.66
HHLA3Q9XRX5 MIR519A2-201ENST00000384990 87 ntBASIC-1.58□□□□□ -2.66
HHLA3Q9XRX5 AL691482.2-201ENST00000457453 84 ntBASIC-1.58□□□□□ -2.66
HHLA3Q9XRX5 MIR548X2-201ENST00000579776 100 ntBASIC-1.58□□□□□ -2.66
HHLA3Q9XRX5 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.58□□□□□ -2.66
HHLA3Q9XRX5 RNU5F-1-201ENST00000362507 117 ntBASIC-1.59□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.59□□□□□ -2.66
HHLA3Q9XRX5 MIR521-2-201ENST00000384818 87 ntBASIC-1.59□□□□□ -2.66
HHLA3Q9XRX5 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.59□□□□□ -2.66
HHLA3Q9XRX5 SNX3P1X-201ENST00000414887 175 ntBASIC-1.59□□□□□ -2.66
HHLA3Q9XRX5 AL353691.2-201ENST00000443795 59 ntBASIC-1.59□□□□□ -2.66
HHLA3Q9XRX5 RNU6-226P-201ENST00000363778 107 ntBASIC-1.6□□□□□ -2.67
HHLA3Q9XRX5 RNA5SP331-201ENST00000364986 107 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 276.6 ms