Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 MIR520E-201ENST00000384867 87 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNU7-74P-201ENST00000459104 62 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNA5SP220-201ENST00000516298 104 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNU6-135P-201ENST00000516769 101 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNU6-940P-201ENST00000363433 104 ntBASIC1.32□□□□□ -2.2
RC3H2Q9HBD1 SNORD114-27-201ENST00000363766 70 ntBASIC1.32□□□□□ -2.2
RC3H2Q9HBD1 RNA5SP117-201ENST00000365294 118 ntBASIC1.32□□□□□ -2.2
RC3H2Q9HBD1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.32□□□□□ -2.2
RC3H2Q9HBD1 RNU6-1089P-201ENST00000516473 104 ntBASIC1.32□□□□□ -2.2
RC3H2Q9HBD1 RNA5SP215-201ENST00000363440 122 ntBASIC1.31□□□□□ -2.2
RC3H2Q9HBD1 RNU1-141P-201ENST00000364623 158 ntBASIC1.31□□□□□ -2.2
RC3H2Q9HBD1 RNA5SP47-201ENST00000517230 109 ntBASIC1.31□□□□□ -2.2
RC3H2Q9HBD1 MIR4460-201ENST00000577862 86 ntBASIC1.31□□□□□ -2.2
RC3H2Q9HBD1 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
RC3H2Q9HBD1 SNORD89-201ENST00000390981 114 ntBASIC1.3□□□□□ -2.2
RC3H2Q9HBD1 SNORA75.1-201ENST00000391130 148 ntBASIC1.3□□□□□ -2.2
RC3H2Q9HBD1 RNU6-716P-201ENST00000365621 103 ntBASIC1.29□□□□□ -2.2
RC3H2Q9HBD1 SNORD105-201ENST00000386910 85 ntBASIC1.29□□□□□ -2.2
RC3H2Q9HBD1 RNU6-269P-201ENST00000391077 97 ntBASIC1.29□□□□□ -2.2
RC3H2Q9HBD1 AL157398.1-201ENST00000452981 186 ntBASIC1.29□□□□□ -2.2
RC3H2Q9HBD1 RPS29P1-201ENST00000465274 159 ntBASIC1.29□□□□□ -2.2
RC3H2Q9HBD1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.29□□□□□ -2.2
RC3H2Q9HBD1 AC018659.1-201ENST00000551083 169 ntBASIC1.29□□□□□ -2.2
RC3H2Q9HBD1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
RC3H2Q9HBD1 MIR548L-201ENST00000408303 86 ntBASIC1.28□□□□□ -2.2
RC3H2Q9HBD1 FABP5P4-201ENST00000437203 171 ntBASIC1.28□□□□□ -2.2
RC3H2Q9HBD1 RNU6-469P-201ENST00000516253 101 ntBASIC1.28□□□□□ -2.2
RC3H2Q9HBD1 RNU5B-6P-201ENST00000516765 68 ntBASIC1.28□□□□□ -2.2
RC3H2Q9HBD1 RNU6-122P-201ENST00000516818 107 ntBASIC1.28□□□□□ -2.2
RC3H2Q9HBD1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
RC3H2Q9HBD1 SNORD113-4-201ENST00000364802 75 ntBASIC1.27□□□□□ -2.21
RC3H2Q9HBD1 snoU13.13-201ENST00000458842 104 ntBASIC1.27□□□□□ -2.21
RC3H2Q9HBD1 RNA5SP484-201ENST00000458857 111 ntBASIC1.27□□□□□ -2.21
RC3H2Q9HBD1 RNA5SP480-201ENST00000516840 109 ntBASIC1.27□□□□□ -2.21
RC3H2Q9HBD1 MIR6734-201ENST00000621166 68 ntBASIC1.27□□□□□ -2.21
RC3H2Q9HBD1 MIR200A-201ENST00000384875 90 ntBASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 MIR3678-201ENST00000578455 94 ntBASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 MIR548V-201ENST00000584165 80 ntBASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 RNU6-92P-201ENST00000605893 104 ntBASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 MIR6788-201ENST00000618842 66 ntBASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 PVT1_3.1-201ENST00000620853 95 ntBASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 MIR7978-201ENST00000636158 59 ntBASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
RC3H2Q9HBD1 SNORD60.1-201ENST00000362451 73 ntBASIC1.25□□□□□ -2.21
RC3H2Q9HBD1 Y_RNA.250-201ENST00000364542 110 ntBASIC1.25□□□□□ -2.21
RC3H2Q9HBD1 SNORA8.2-201ENST00000384372 139 ntBASIC1.25□□□□□ -2.21
RC3H2Q9HBD1 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
RC3H2Q9HBD1 MIR573-201ENST00000384964 99 ntBASIC1.25□□□□□ -2.21
RC3H2Q9HBD1 MIR151B-201ENST00000584249 96 ntBASIC1.25□□□□□ -2.21
RC3H2Q9HBD1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 MIR521-2-201ENST00000384818 87 ntBASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 U7.7-201ENST00000459276 60 ntBASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 SCARNA16.5-201ENST00000517114 183 ntBASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 MIR3938-201ENST00000582157 103 ntBASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RC3H2Q9HBD1 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
RC3H2Q9HBD1 MIR548J-201ENST00000408833 112 ntBASIC1.23□□□□□ -2.21
RC3H2Q9HBD1 MIR3612-201ENST00000579753 87 ntBASIC1.23□□□□□ -2.21
RC3H2Q9HBD1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.23□□□□□ -2.21
RC3H2Q9HBD1 AL162376.1-201ENST00000624117 175 ntBASIC1.23□□□□□ -2.21
RC3H2Q9HBD1 MIR373-201ENST00000362273 69 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 RNU6-302P-201ENST00000365249 107 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 RNU6-1162P-201ENST00000384443 104 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 MIR630-201ENST00000384957 97 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 Y_RNA.633-201ENST00000459107 95 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 SNORD124-201ENST00000459577 104 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 U2.7-201ENST00000619197 100 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 MIR6828-201ENST00000636181 60 ntBASIC1.22□□□□□ -2.21
RC3H2Q9HBD1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
RC3H2Q9HBD1 SNORD114-4-201ENST00000363962 75 ntBASIC1.21□□□□□ -2.22
RC3H2Q9HBD1 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
RC3H2Q9HBD1 AC021146.9-201ENST00000512503 156 ntBASIC1.21□□□□□ -2.22
RC3H2Q9HBD1 RNU7-174P-201ENST00000516248 59 ntBASIC1.21□□□□□ -2.22
RC3H2Q9HBD1 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
RC3H2Q9HBD1 MIR6515-201ENST00000619843 57 ntBASIC1.21□□□□□ -2.22
RC3H2Q9HBD1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
RC3H2Q9HBD1 SNORA33.1-201ENST00000364957 130 ntBASIC1.2□□□□□ -2.22
RC3H2Q9HBD1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.2□□□□□ -2.22
RC3H2Q9HBD1 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
RC3H2Q9HBD1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.2□□□□□ -2.22
RC3H2Q9HBD1 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
RC3H2Q9HBD1 MIR582-201ENST00000365731 98 ntBASIC1.19□□□□□ -2.22
RC3H2Q9HBD1 Y_RNA.722-201ENST00000517279 114 ntBASIC1.19□□□□□ -2.22
RC3H2Q9HBD1 MIR548AE1-201ENST00000583292 70 ntBASIC1.19□□□□□ -2.22
RC3H2Q9HBD1 U4.4-201ENST00000620626 117 ntBASIC1.19□□□□□ -2.22
RC3H2Q9HBD1 SNORA36.1-201ENST00000363424 132 ntBASIC1.18□□□□□ -2.22
RC3H2Q9HBD1 SNORD114-26-201ENST00000363543 72 ntBASIC1.18□□□□□ -2.22
RC3H2Q9HBD1 MIR548C-201ENST00000384815 97 ntBASIC1.18□□□□□ -2.22
RC3H2Q9HBD1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RC3H2Q9HBD1 MIR652-201ENST00000385278 98 ntBASIC1.17□□□□□ -2.22
RC3H2Q9HBD1 AC025627.3-201ENST00000582078 182 ntBASIC1.17□□□□□ -2.22
RC3H2Q9HBD1 RNU6-698P-201ENST00000363523 107 ntBASIC1.16□□□□□ -2.22
RC3H2Q9HBD1 RNU6-34P-201ENST00000364874 107 ntBASIC1.16□□□□□ -2.22
RC3H2Q9HBD1 RNU6-936P-201ENST00000384005 107 ntBASIC1.16□□□□□ -2.22
RC3H2Q9HBD1 MIR517B-201ENST00000385102 67 ntBASIC1.16□□□□□ -2.22
RC3H2Q9HBD1 MIR548E-201ENST00000408287 88 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 266.4 ms