Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 Y_RNA.722-201ENST00000517279 114 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 MIR3612-201ENST00000579753 87 ntBASIC1.49□□□□□ -2.17
NUCKS1Q9H1E3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NUCKS1Q9H1E3 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
NUCKS1Q9H1E3 AC021146.9-201ENST00000512503 156 ntBASIC1.48□□□□□ -2.17
NUCKS1Q9H1E3 AL162376.1-201ENST00000624117 175 ntBASIC1.47□□□□□ -2.17
NUCKS1Q9H1E3 U2.7-201ENST00000619197 100 ntBASIC1.46□□□□□ -2.18
NUCKS1Q9H1E3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.46□□□□□ -2.18
NUCKS1Q9H1E3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
NUCKS1Q9H1E3 MIR19B1-201ENST00000384829 87 ntBASIC1.45□□□□□ -2.18
NUCKS1Q9H1E3 RNU7-174P-201ENST00000516248 59 ntBASIC1.45□□□□□ -2.18
NUCKS1Q9H1E3 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
NUCKS1Q9H1E3 SNORA33.1-201ENST00000364957 130 ntBASIC1.44□□□□□ -2.18
NUCKS1Q9H1E3 RNU6-936P-201ENST00000384005 107 ntBASIC1.44□□□□□ -2.18
NUCKS1Q9H1E3 MIR517B-201ENST00000385102 67 ntBASIC1.44□□□□□ -2.18
NUCKS1Q9H1E3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.44□□□□□ -2.18
NUCKS1Q9H1E3 SNORD124-201ENST00000459577 104 ntBASIC1.44□□□□□ -2.18
NUCKS1Q9H1E3 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
NUCKS1Q9H1E3 MIR6828-201ENST00000636181 60 ntBASIC1.44□□□□□ -2.18
NUCKS1Q9H1E3 RNU6-698P-201ENST00000363523 107 ntBASIC1.43□□□□□ -2.18
NUCKS1Q9H1E3 RNU6-34P-201ENST00000364874 107 ntBASIC1.43□□□□□ -2.18
NUCKS1Q9H1E3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.43□□□□□ -2.18
NUCKS1Q9H1E3 RNU6-808P-201ENST00000391233 108 ntBASIC1.43□□□□□ -2.18
NUCKS1Q9H1E3 MIR4498-201ENST00000577599 66 ntBASIC1.43□□□□□ -2.18
NUCKS1Q9H1E3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 SNORA15B-2-201ENST00000384058 135 ntBASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 SNORA15B-1-201ENST00000384334 135 ntBASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 MIR652-201ENST00000385278 98 ntBASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 SNORD113-2-201ENST00000391082 72 ntBASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 SCARNA17.3-201ENST00000516381 125 ntBASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 U4.4-201ENST00000620626 117 ntBASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NUCKS1Q9H1E3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NUCKS1Q9H1E3 Y_RNA.125-201ENST00000363371 111 ntBASIC1.41□□□□□ -2.18
NUCKS1Q9H1E3 SNORA63.6-201ENST00000364921 119 ntBASIC1.41□□□□□ -2.18
NUCKS1Q9H1E3 Y_RNA.407-201ENST00000383986 113 ntBASIC1.41□□□□□ -2.18
NUCKS1Q9H1E3 MIR200A-201ENST00000384875 90 ntBASIC1.41□□□□□ -2.18
NUCKS1Q9H1E3 MIR548AE1-201ENST00000583292 70 ntBASIC1.41□□□□□ -2.18
NUCKS1Q9H1E3 uc_338.10-201ENST00000621872 182 ntBASIC1.41□□□□□ -2.18
NUCKS1Q9H1E3 MIR582-201ENST00000365731 98 ntBASIC1.4□□□□□ -2.19
NUCKS1Q9H1E3 RNA5SP227-201ENST00000516184 113 ntBASIC1.4□□□□□ -2.19
NUCKS1Q9H1E3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUCKS1Q9H1E3 SNORA36.1-201ENST00000363424 132 ntBASIC1.39□□□□□ -2.19
NUCKS1Q9H1E3 RNU6-1184P-201ENST00000384588 108 ntBASIC1.39□□□□□ -2.19
NUCKS1Q9H1E3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.39□□□□□ -2.19
NUCKS1Q9H1E3 MIR548E-201ENST00000408287 88 ntBASIC1.38□□□□□ -2.19
NUCKS1Q9H1E3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
NUCKS1Q9H1E3 AC025627.3-201ENST00000582078 182 ntBASIC1.38□□□□□ -2.19
NUCKS1Q9H1E3 MIR4473-201ENST00000583731 91 ntBASIC1.38□□□□□ -2.19
NUCKS1Q9H1E3 AC006210.1-201ENST00000424882 111 ntBASIC1.37□□□□□ -2.19
NUCKS1Q9H1E3 MIR18A-201ENST00000362310 71 ntBASIC1.36□□□□□ -2.19
NUCKS1Q9H1E3 RNU6-1312P-201ENST00000362425 108 ntBASIC1.36□□□□□ -2.19
NUCKS1Q9H1E3 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
NUCKS1Q9H1E3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.36□□□□□ -2.19
NUCKS1Q9H1E3 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
NUCKS1Q9H1E3 SNORD110-201ENST00000408189 75 ntBASIC1.35□□□□□ -2.19
NUCKS1Q9H1E3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
NUCKS1Q9H1E3 RNA5SP268-201ENST00000516828 124 ntBASIC1.35□□□□□ -2.19
NUCKS1Q9H1E3 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
NUCKS1Q9H1E3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
NUCKS1Q9H1E3 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
NUCKS1Q9H1E3 RNA5SP255-201ENST00000516370 107 ntBASIC1.34□□□□□ -2.19
NUCKS1Q9H1E3 AC011195.1-201ENST00000578177 177 ntBASIC1.34□□□□□ -2.19
NUCKS1Q9H1E3 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
NUCKS1Q9H1E3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NUCKS1Q9H1E3 SNORD99-201ENST00000408612 74 ntBASIC1.33□□□□□ -2.2
NUCKS1Q9H1E3 MIR7107-201ENST00000611489 80 ntBASIC1.33□□□□□ -2.2
NUCKS1Q9H1E3 Y_RNA.246-201ENST00000364495 108 ntBASIC1.32□□□□□ -2.2
NUCKS1Q9H1E3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
NUCKS1Q9H1E3 RNA5SP94-201ENST00000516917 108 ntBASIC1.32□□□□□ -2.2
NUCKS1Q9H1E3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 SNORD114-24-201ENST00000365029 72 ntBASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 Y_RNA.325-201ENST00000365171 122 ntBASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 RNU6-520P-201ENST00000384717 104 ntBASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 SNORA41B-201ENST00000384785 128 ntBASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 OR2A41P-201ENST00000473586 105 ntBASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 TRMT112P2-201ENST00000512910 132 ntBASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 SNORA70.25-201ENST00000612741 95 ntBASIC1.31□□□□□ -2.2
NUCKS1Q9H1E3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
NUCKS1Q9H1E3 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
NUCKS1Q9H1E3 RNU4-45P-201ENST00000365469 141 ntBASIC1.29□□□□□ -2.2
NUCKS1Q9H1E3 RNU6-1246P-201ENST00000391064 107 ntBASIC1.29□□□□□ -2.2
NUCKS1Q9H1E3 RNA5SP404-201ENST00000517118 132 ntBASIC1.29□□□□□ -2.2
NUCKS1Q9H1E3 CYP3A54P-201ENST00000566950 75 ntBASIC1.29□□□□□ -2.2
NUCKS1Q9H1E3 SNORA9.1-201ENST00000362412 131 ntBASIC1.28□□□□□ -2.2
NUCKS1Q9H1E3 MIR548AD-201ENST00000584780 82 ntBASIC1.28□□□□□ -2.2
NUCKS1Q9H1E3 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
NUCKS1Q9H1E3 MIR516B1-201ENST00000385211 90 ntBASIC1.27□□□□□ -2.21
NUCKS1Q9H1E3 MIR4752-201ENST00000579672 72 ntBASIC1.27□□□□□ -2.21
NUCKS1Q9H1E3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.27□□□□□ -2.21
NUCKS1Q9H1E3 AC090617.8-201ENST00000623339 167 ntBASIC1.27□□□□□ -2.21
NUCKS1Q9H1E3 U6.96-201ENST00000636425 70 ntBASIC1.27□□□□□ -2.21
NUCKS1Q9H1E3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.25□□□□□ -2.21
NUCKS1Q9H1E3 HMGN2P22-201ENST00000427588 175 ntBASIC1.25□□□□□ -2.21
NUCKS1Q9H1E3 MIR6078-201ENST00000611069 100 ntBASIC1.25□□□□□ -2.21
NUCKS1Q9H1E3 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms