Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 RNU7-129P-201ENST00000516128 62 ntBASIC0.49□□□□□ -2.33
HIST1H2AJQ99878 RNU6-340P-201ENST00000364005 107 ntBASIC0.48□□□□□ -2.33
HIST1H2AJQ99878 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.48□□□□□ -2.33
HIST1H2AJQ99878 RNA5SP225-201ENST00000410874 135 ntBASIC0.48□□□□□ -2.33
HIST1H2AJQ99878 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
HIST1H2AJQ99878 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
HIST1H2AJQ99878 Y_RNA.407-201ENST00000383986 113 ntBASIC0.47□□□□□ -2.33
HIST1H2AJQ99878 Y_RNA.532-201ENST00000384590 113 ntBASIC0.47□□□□□ -2.33
HIST1H2AJQ99878 MIR501-201ENST00000390204 84 ntBASIC0.47□□□□□ -2.33
HIST1H2AJQ99878 Y_RNA.606-201ENST00000410579 103 ntBASIC0.47□□□□□ -2.33
HIST1H2AJQ99878 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
HIST1H2AJQ99878 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 Y_RNA.125-201ENST00000363371 111 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNA5SP128-201ENST00000365305 116 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNU7-24P-201ENST00000458867 62 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNU6-848P-201ENST00000515948 107 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNU6-617P-201ENST00000516147 107 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNU6-473P-201ENST00000516164 107 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNU6-1049P-201ENST00000516414 107 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNU6-1223P-201ENST00000517124 104 ntBASIC0.46□□□□□ -2.34
HIST1H2AJQ99878 RNU6-274P-201ENST00000459566 107 ntBASIC0.45□□□□□ -2.34
HIST1H2AJQ99878 Y_RNA.676-201ENST00000516393 96 ntBASIC0.45□□□□□ -2.34
HIST1H2AJQ99878 MIR4484-201ENST00000582855 83 ntBASIC0.45□□□□□ -2.34
HIST1H2AJQ99878 U7.6-201ENST00000610841 64 ntBASIC0.45□□□□□ -2.34
HIST1H2AJQ99878 MIR499B-201ENST00000636498 73 ntBASIC0.45□□□□□ -2.34
HIST1H2AJQ99878 RNU6-815P-201ENST00000384080 113 ntBASIC0.44□□□□□ -2.34
HIST1H2AJQ99878 MIR216A-201ENST00000385063 110 ntBASIC0.44□□□□□ -2.34
HIST1H2AJQ99878 MIR652-201ENST00000385278 98 ntBASIC0.44□□□□□ -2.34
HIST1H2AJQ99878 RNU6-303P-201ENST00000517091 106 ntBASIC0.44□□□□□ -2.34
HIST1H2AJQ99878 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
HIST1H2AJQ99878 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
HIST1H2AJQ99878 RNU6-1094P-201ENST00000362416 104 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 RNU6-681P-201ENST00000364012 104 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 RNU6-380P-201ENST00000410207 107 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 AC073261.1-201ENST00000429409 121 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 RNA5SP220-201ENST00000516298 104 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 MIR4677-201ENST00000584153 80 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 uc_338.10-201ENST00000621872 182 ntBASIC0.43□□□□□ -2.34
HIST1H2AJQ99878 RNA5SP62-201ENST00000363457 110 ntBASIC0.42□□□□□ -2.34
HIST1H2AJQ99878 RNU6-154P-201ENST00000384306 106 ntBASIC0.42□□□□□ -2.34
HIST1H2AJQ99878 RNU6-279P-201ENST00000391297 101 ntBASIC0.42□□□□□ -2.34
HIST1H2AJQ99878 RNA5SP247-201ENST00000411181 105 ntBASIC0.42□□□□□ -2.34
HIST1H2AJQ99878 RNU6-857P-201ENST00000515893 110 ntBASIC0.42□□□□□ -2.34
HIST1H2AJQ99878 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
HIST1H2AJQ99878 SNORA9.1-201ENST00000362412 131 ntBASIC0.41□□□□□ -2.34
HIST1H2AJQ99878 MIR516B1-201ENST00000385211 90 ntBASIC0.41□□□□□ -2.34
HIST1H2AJQ99878 RNU6-1275P-201ENST00000391087 107 ntBASIC0.41□□□□□ -2.34
HIST1H2AJQ99878 AL691482.2-201ENST00000457453 84 ntBASIC0.41□□□□□ -2.34
HIST1H2AJQ99878 MIR548AD-201ENST00000584780 82 ntBASIC0.41□□□□□ -2.34
HIST1H2AJQ99878 RNU6-330P-201ENST00000363015 107 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 MIR203A-201ENST00000384836 110 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 AC074348.1-201ENST00000426503 132 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 Y_RNA.685-201ENST00000516532 108 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 RNA5SP395-201ENST00000516567 118 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 RNU6-807P-201ENST00000516805 107 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
HIST1H2AJQ99878 SNORD114-4-201ENST00000363962 75 ntBASIC0.39□□□□□ -2.35
HIST1H2AJQ99878 RNU6-1039P-201ENST00000383931 107 ntBASIC0.39□□□□□ -2.35
HIST1H2AJQ99878 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
HIST1H2AJQ99878 SCARNA18B-201ENST00000458806 135 ntBASIC0.39□□□□□ -2.35
HIST1H2AJQ99878 SCARNA17.3-201ENST00000516381 125 ntBASIC0.39□□□□□ -2.35
HIST1H2AJQ99878 MIR6509-201ENST00000614603 85 ntBASIC0.39□□□□□ -2.35
HIST1H2AJQ99878 Y_RNA.36-201ENST00000362602 112 ntBASIC0.38□□□□□ -2.35
HIST1H2AJQ99878 RNU6-990P-201ENST00000364385 104 ntBASIC0.38□□□□□ -2.35
HIST1H2AJQ99878 AC069113.3-201ENST00000521019 150 ntBASIC0.38□□□□□ -2.35
HIST1H2AJQ99878 MIR6734-201ENST00000621166 68 ntBASIC0.38□□□□□ -2.35
HIST1H2AJQ99878 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
HIST1H2AJQ99878 MIR1297-201ENST00000637311 77 ntBASIC0.38□□□□□ -2.35
HIST1H2AJQ99878 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
HIST1H2AJQ99878 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
HIST1H2AJQ99878 RNU6-127P-201ENST00000390897 107 ntBASIC0.37□□□□□ -2.35
HIST1H2AJQ99878 MIR1287-201ENST00000408492 90 ntBASIC0.37□□□□□ -2.35
HIST1H2AJQ99878 Y_RNA.226-201ENST00000364337 114 ntBASIC0.36□□□□□ -2.35
HIST1H2AJQ99878 SNORA8.1-201ENST00000384250 140 ntBASIC0.36□□□□□ -2.35
HIST1H2AJQ99878 RNU6-752P-201ENST00000516376 102 ntBASIC0.36□□□□□ -2.35
HIST1H2AJQ99878 RNU7-188P-201ENST00000517063 64 ntBASIC0.36□□□□□ -2.35
HIST1H2AJQ99878 MIR3925-201ENST00000584674 77 ntBASIC0.36□□□□□ -2.35
HIST1H2AJQ99878 AC084368.1-201ENST00000620935 65 ntBASIC0.36□□□□□ -2.35
HIST1H2AJQ99878 Y_RNA.788-201ENST00000622394 112 ntBASIC0.36□□□□□ -2.35
HIST1H2AJQ99878 RNU6-42P-201ENST00000384165 107 ntBASIC0.35□□□□□ -2.35
HIST1H2AJQ99878 RNU6-24P-201ENST00000384440 107 ntBASIC0.35□□□□□ -2.35
HIST1H2AJQ99878 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
HIST1H2AJQ99878 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
HIST1H2AJQ99878 MIR582-201ENST00000365731 98 ntBASIC0.34□□□□□ -2.36
HIST1H2AJQ99878 MIR643-201ENST00000385267 97 ntBASIC0.34□□□□□ -2.36
HIST1H2AJQ99878 RNU6-260P-201ENST00000384092 107 ntBASIC0.33□□□□□ -2.36
HIST1H2AJQ99878 MIR936-201ENST00000401264 98 ntBASIC0.33□□□□□ -2.36
HIST1H2AJQ99878 MIR548E-201ENST00000408287 88 ntBASIC0.33□□□□□ -2.36
HIST1H2AJQ99878 SNORA40.17-201ENST00000517256 115 ntBASIC0.33□□□□□ -2.36
HIST1H2AJQ99878 MIR3675-201ENST00000583661 73 ntBASIC0.33□□□□□ -2.36
HIST1H2AJQ99878 MIR3657-201ENST00000584818 117 ntBASIC0.33□□□□□ -2.36
HIST1H2AJQ99878 MIR664A-201ENST00000626086 82 ntBASIC0.33□□□□□ -2.36
HIST1H2AJQ99878 SNORD114-29-201ENST00000364819 70 ntBASIC0.32□□□□□ -2.36
HIST1H2AJQ99878 RNA5SP147-201ENST00000516493 109 ntBASIC0.32□□□□□ -2.36
HIST1H2AJQ99878 SCARNA11.2-201ENST00000517183 154 ntBASIC0.32□□□□□ -2.36
HIST1H2AJQ99878 MIR20A-201ENST00000362279 71 ntBASIC0.31□□□□□ -2.36
HIST1H2AJQ99878 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
HIST1H2AJQ99878 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms