Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.82□□□□□ -2.7
SSX9Q7RTT3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.82□□□□□ -2.7
SSX9Q7RTT3 AL158147.1-201ENST00000443970 75 ntBASIC-1.83□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.83□□□□□ -2.7
SSX9Q7RTT3 AC068339.1-201ENST00000526965 141 ntBASIC-1.83□□□□□ -2.7
SSX9Q7RTT3 AL353803.5-201ENST00000599815 141 ntBASIC-1.83□□□□□ -2.7
SSX9Q7RTT3 RNU6-797P-201ENST00000363101 109 ntBASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 MTCYBP9-201ENST00000431021 303 ntBASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 MIR3064-201ENST00000581130 66 ntBASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 AC090617.8-201ENST00000623339 167 ntBASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 AP001340.1-201ENST00000624405 217 ntBASIC-1.84□□□□□ -2.7
SSX9Q7RTT3 MIR4694-201ENST00000578534 80 ntBASIC-1.85□□□□□ -2.71
SSX9Q7RTT3 SNORA24B-201ENST00000384176 131 ntBASIC-1.86□□□□□ -2.71
SSX9Q7RTT3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.86□□□□□ -2.71
SSX9Q7RTT3 MIR5591-201ENST00000578248 65 ntBASIC-1.86□□□□□ -2.71
SSX9Q7RTT3 AC025166.1-201ENST00000612411 163 ntBASIC-1.86□□□□□ -2.71
SSX9Q7RTT3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 MIR548A1-201ENST00000385041 97 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 RNU6-861P-201ENST00000516745 106 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 SNORA81.3-201ENST00000517283 198 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 MIR4464-201ENST00000580818 92 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 AC104996.3-201ENST00000590718 94 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 MIR1246-201ENST00000636535 73 ntBASIC-1.87□□□□□ -2.71
SSX9Q7RTT3 RNU6-832P-201ENST00000363319 107 ntBASIC-1.88□□□□□ -2.71
SSX9Q7RTT3 MIR568-201ENST00000385036 95 ntBASIC-1.88□□□□□ -2.71
SSX9Q7RTT3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.88□□□□□ -2.71
SSX9Q7RTT3 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 MIR8485-201ENST00000401372 91 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 MIR4723-201ENST00000585070 81 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 AL445584.3-201ENST00000617173 78 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 MIR6888-201ENST00000621977 67 ntBASIC-1.89□□□□□ -2.71
SSX9Q7RTT3 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.9□□□□□ -2.71
SSX9Q7RTT3 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.9□□□□□ -2.71
SSX9Q7RTT3 AL117351.2-201ENST00000513571 157 ntBASIC-1.9□□□□□ -2.71
SSX9Q7RTT3 MIR4770-201ENST00000579149 58 ntBASIC-1.9□□□□□ -2.71
SSX9Q7RTT3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.9□□□□□ -2.71
SSX9Q7RTT3 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.91□□□□□ -2.72
SSX9Q7RTT3 RNU6-738P-201ENST00000384531 106 ntBASIC-1.91□□□□□ -2.72
SSX9Q7RTT3 MIR527-201ENST00000385244 85 ntBASIC-1.91□□□□□ -2.72
SSX9Q7RTT3 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.91□□□□□ -2.72
SSX9Q7RTT3 RNY3P2-201ENST00000362918 102 ntBASIC-1.92□□□□□ -2.72
SSX9Q7RTT3 MIR29B1-201ENST00000385015 81 ntBASIC-1.92□□□□□ -2.72
SSX9Q7RTT3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.92□□□□□ -2.72
SSX9Q7RTT3 RNU6-644P-201ENST00000391155 98 ntBASIC-1.92□□□□□ -2.72
SSX9Q7RTT3 SNORD4B-201ENST00000459083 72 ntBASIC-1.92□□□□□ -2.72
SSX9Q7RTT3 MIR548Z-201ENST00000584743 97 ntBASIC-1.92□□□□□ -2.72
SSX9Q7RTT3 U7.2-201ENST00000607576 63 ntBASIC-1.92□□□□□ -2.72
SSX9Q7RTT3 SNORD58C-201ENST00000365223 64 ntBASIC-1.93□□□□□ -2.72
SSX9Q7RTT3 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.93□□□□□ -2.72
SSX9Q7RTT3 RNA5SP147-201ENST00000516493 109 ntBASIC-1.93□□□□□ -2.72
SSX9Q7RTT3 AC103810.7-201ENST00000607821 91 ntBASIC-1.93□□□□□ -2.72
SSX9Q7RTT3 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.94□□□□□ -2.72
SSX9Q7RTT3 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.94□□□□□ -2.72
SSX9Q7RTT3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.94□□□□□ -2.72
SSX9Q7RTT3 MIR4439-201ENST00000583746 80 ntBASIC-1.94□□□□□ -2.72
SSX9Q7RTT3 AC006254.2-201ENST00000603259 279 ntBASIC-1.94□□□□□ -2.72
SSX9Q7RTT3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.95□□□□□ -2.72
SSX9Q7RTT3 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.95□□□□□ -2.72
SSX9Q7RTT3 SNORD116-18-201ENST00000383961 92 ntBASIC-1.95□□□□□ -2.72
SSX9Q7RTT3 RNU6-260P-201ENST00000384092 107 ntBASIC-1.95□□□□□ -2.72
SSX9Q7RTT3 snoU13.17-201ENST00000458802 104 ntBASIC-1.95□□□□□ -2.72
SSX9Q7RTT3 MIR548X2-201ENST00000579776 100 ntBASIC-1.95□□□□□ -2.72
SSX9Q7RTT3 MIR3613-201ENST00000579844 87 ntBASIC-1.95□□□□□ -2.72
SSX9Q7RTT3 RNU6-682P-201ENST00000363843 106 ntBASIC-1.96□□□□□ -2.72
SSX9Q7RTT3 SNORA33.1-201ENST00000364957 130 ntBASIC-1.96□□□□□ -2.72
SSX9Q7RTT3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.96□□□□□ -2.72
SSX9Q7RTT3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.96□□□□□ -2.72
SSX9Q7RTT3 MIR1255B2-201ENST00000408618 67 ntBASIC-1.96□□□□□ -2.72
SSX9Q7RTT3 MTATP6P29-201ENST00000415057 132 ntBASIC-1.96□□□□□ -2.72
SSX9Q7RTT3 MIR6818-201ENST00000621576 65 ntBASIC-1.96□□□□□ -2.72
SSX9Q7RTT3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 SNORD45B-201ENST00000364617 72 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 RNU6-813P-201ENST00000384691 107 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 MIR203A-201ENST00000384836 110 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 SNORD90-201ENST00000391145 111 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 MIR889-201ENST00000401280 79 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 RNU6-519P-201ENST00000410590 108 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 MIR6129-201ENST00000616087 109 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.97□□□□□ -2.72
SSX9Q7RTT3 AL118496.2-201ENST00000448300 230 ntBASIC-1.98□□□□□ -2.73
SSX9Q7RTT3 RNU7-120P-201ENST00000459334 63 ntBASIC-1.98□□□□□ -2.73
SSX9Q7RTT3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.98□□□□□ -2.73
SSX9Q7RTT3 AL035470.1-201ENST00000622571 220 ntBASIC-1.98□□□□□ -2.73
SSX9Q7RTT3 MIR4773-1-201ENST00000637203 78 ntBASIC-1.98□□□□□ -2.73
SSX9Q7RTT3 SNORA63-201ENST00000363450 132 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms