Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-776P-201ENST00000364403 104 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 RNU6-1022P-201ENST00000365049 104 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 MIR598-201ENST00000384868 97 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 SNORD75.2-201ENST00000408784 58 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 AC018659.1-201ENST00000551083 169 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 MIR3134-201ENST00000579433 74 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 SNORA70.25-201ENST00000612741 95 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 MIR1297-201ENST00000637311 77 ntBASIC0.57□□□□□ -2.32
ZNF549Q6P9A3 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 MIR889-201ENST00000401280 79 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 AC069271.1-201ENST00000445577 156 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 NAMPTP3-201ENST00000569273 224 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 MIR4460-201ENST00000577862 86 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 AC069503.3-201ENST00000618674 145 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
ZNF549Q6P9A3 SNORA40.8-201ENST00000411034 126 ntBASIC0.55□□□□□ -2.32
ZNF549Q6P9A3 RNA5SP436-201ENST00000516020 115 ntBASIC0.55□□□□□ -2.32
ZNF549Q6P9A3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.55□□□□□ -2.32
ZNF549Q6P9A3 U7.4-201ENST00000614961 63 ntBASIC0.55□□□□□ -2.32
ZNF549Q6P9A3 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.55□□□□□ -2.32
ZNF549Q6P9A3 MIR664A-201ENST00000626086 82 ntBASIC0.55□□□□□ -2.32
ZNF549Q6P9A3 AC073869.9-201ENST00000641610 120 ntBASIC0.55□□□□□ -2.32
ZNF549Q6P9A3 MIR518A1-201ENST00000385068 85 ntBASIC0.54□□□□□ -2.32
ZNF549Q6P9A3 RNU6-380P-201ENST00000410207 107 ntBASIC0.54□□□□□ -2.32
ZNF549Q6P9A3 RNU6-807P-201ENST00000516805 107 ntBASIC0.54□□□□□ -2.32
ZNF549Q6P9A3 SNORA40.17-201ENST00000517256 115 ntBASIC0.54□□□□□ -2.32
ZNF549Q6P9A3 MIR4773-1-201ENST00000637203 78 ntBASIC0.54□□□□□ -2.32
ZNF549Q6P9A3 MIR4662A-201ENST00000637499 67 ntBASIC0.54□□□□□ -2.32
ZNF549Q6P9A3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
ZNF549Q6P9A3 MIR6755-201ENST00000619993 66 ntBASIC0.53□□□□□ -2.32
ZNF549Q6P9A3 MIR6513-201ENST00000621188 64 ntBASIC0.53□□□□□ -2.32
ZNF549Q6P9A3 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
ZNF549Q6P9A3 RNU6-681P-201ENST00000364012 104 ntBASIC0.52□□□□□ -2.33
ZNF549Q6P9A3 RNU6-1296P-201ENST00000383879 107 ntBASIC0.52□□□□□ -2.33
ZNF549Q6P9A3 HMGN2P22-201ENST00000427588 175 ntBASIC0.52□□□□□ -2.33
ZNF549Q6P9A3 AC098934.3-201ENST00000430450 190 ntBASIC0.52□□□□□ -2.33
ZNF549Q6P9A3 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
ZNF549Q6P9A3 MIR548AE1-201ENST00000583292 70 ntBASIC0.52□□□□□ -2.33
ZNF549Q6P9A3 SNORA8.1-201ENST00000384250 140 ntBASIC0.51□□□□□ -2.33
ZNF549Q6P9A3 SNORD110-201ENST00000408189 75 ntBASIC0.51□□□□□ -2.33
ZNF549Q6P9A3 AC006210.1-201ENST00000424882 111 ntBASIC0.51□□□□□ -2.33
ZNF549Q6P9A3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.51□□□□□ -2.33
ZNF549Q6P9A3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.51□□□□□ -2.33
ZNF549Q6P9A3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
ZNF549Q6P9A3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 RNU6-274P-201ENST00000459566 107 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 RNU6-752P-201ENST00000516376 102 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 RNU6-687P-201ENST00000516443 89 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 MIR5706-201ENST00000579841 80 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 MIR3675-201ENST00000583661 73 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
ZNF549Q6P9A3 RNU6-990P-201ENST00000364385 104 ntBASIC0.48□□□□□ -2.33
ZNF549Q6P9A3 RNU6-70P-201ENST00000516438 60 ntBASIC0.48□□□□□ -2.33
ZNF549Q6P9A3 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
ZNF549Q6P9A3 RNU6-1015P-201ENST00000517121 99 ntBASIC0.48□□□□□ -2.33
ZNF549Q6P9A3 SNORD44.1-201ENST00000363202 61 ntBASIC0.47□□□□□ -2.33
ZNF549Q6P9A3 RNU6-411P-201ENST00000384451 107 ntBASIC0.47□□□□□ -2.33
ZNF549Q6P9A3 Y_RNA.565-201ENST00000384719 101 ntBASIC0.47□□□□□ -2.33
ZNF549Q6P9A3 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
ZNF549Q6P9A3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF549Q6P9A3 MIR4473-201ENST00000583731 91 ntBASIC0.47□□□□□ -2.33
ZNF549Q6P9A3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
ZNF549Q6P9A3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 MIR203A-201ENST00000384836 110 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 MIR652-201ENST00000385278 98 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 AL691482.2-201ENST00000457453 84 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 RNU6-848P-201ENST00000515948 107 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 RNU6-617P-201ENST00000516147 107 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 RNU6-473P-201ENST00000516164 107 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 MIR3657-201ENST00000584818 117 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 MIR6509-201ENST00000614603 85 ntBASIC0.46□□□□□ -2.34
ZNF549Q6P9A3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 RNU6-260P-201ENST00000384092 107 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 Y_RNA.545-201ENST00000384652 105 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 MIR216A-201ENST00000385063 110 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 MIR501-201ENST00000390204 84 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 RNU6-587P-201ENST00000391282 106 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 RNU6-863P-201ENST00000515989 104 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
ZNF549Q6P9A3 SNORD115-22-201ENST00000364456 82 ntBASIC0.44□□□□□ -2.34
ZNF549Q6P9A3 SNORA2A-201ENST00000383885 135 ntBASIC0.44□□□□□ -2.34
ZNF549Q6P9A3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.44□□□□□ -2.34
ZNF549Q6P9A3 RN7SL793P-201ENST00000583259 296 ntBASIC0.44□□□□□ -2.34
ZNF549Q6P9A3 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
ZNF549Q6P9A3 SNORD115-31-201ENST00000365318 82 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 266.1 ms