Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.2□□□□□ -2.22
EFEMP1Q12805 SNORD41.1-201ENST00000391000 69 ntBASIC1.2□□□□□ -2.22
EFEMP1Q12805 AC002350.1-201ENST00000490759 375 ntBASIC1.2□□□□□ -2.22
EFEMP1Q12805 MIR548AD-201ENST00000584780 82 ntBASIC1.2□□□□□ -2.22
EFEMP1Q12805 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
EFEMP1Q12805 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
EFEMP1Q12805 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
EFEMP1Q12805 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
EFEMP1Q12805 SNORD28-201ENST00000384706 75 ntBASIC1.19□□□□□ -2.22
EFEMP1Q12805 MIR521-2-201ENST00000384818 87 ntBASIC1.19□□□□□ -2.22
EFEMP1Q12805 MIR517B-201ENST00000385102 67 ntBASIC1.19□□□□□ -2.22
EFEMP1Q12805 SNORD113-2-201ENST00000391082 72 ntBASIC1.19□□□□□ -2.22
EFEMP1Q12805 AC021146.9-201ENST00000512503 156 ntBASIC1.19□□□□□ -2.22
EFEMP1Q12805 RNU6-469P-201ENST00000516253 101 ntBASIC1.19□□□□□ -2.22
EFEMP1Q12805 MIR4639-201ENST00000584938 69 ntBASIC1.19□□□□□ -2.22
EFEMP1Q12805 Y_RNA.250-201ENST00000364542 110 ntBASIC1.18□□□□□ -2.22
EFEMP1Q12805 RNU1-141P-201ENST00000364623 158 ntBASIC1.18□□□□□ -2.22
EFEMP1Q12805 RNU6-42P-201ENST00000384165 107 ntBASIC1.18□□□□□ -2.22
EFEMP1Q12805 RNU7-174P-201ENST00000516248 59 ntBASIC1.18□□□□□ -2.22
EFEMP1Q12805 U2.7-201ENST00000619197 100 ntBASIC1.18□□□□□ -2.22
EFEMP1Q12805 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.18□□□□□ -2.22
EFEMP1Q12805 U4.4-201ENST00000620626 117 ntBASIC1.18□□□□□ -2.22
EFEMP1Q12805 SNORD114-4-201ENST00000363962 75 ntBASIC1.17□□□□□ -2.22
EFEMP1Q12805 RNU6-726P-201ENST00000364680 107 ntBASIC1.17□□□□□ -2.22
EFEMP1Q12805 Y_RNA.379-201ENST00000365653 102 ntBASIC1.17□□□□□ -2.22
EFEMP1Q12805 RNU6-955P-201ENST00000410497 104 ntBASIC1.17□□□□□ -2.22
EFEMP1Q12805 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
EFEMP1Q12805 RNU6-135P-201ENST00000516769 101 ntBASIC1.17□□□□□ -2.22
EFEMP1Q12805 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
EFEMP1Q12805 RNU6-698P-201ENST00000363523 107 ntBASIC1.16□□□□□ -2.22
EFEMP1Q12805 RNU6-34P-201ENST00000364874 107 ntBASIC1.16□□□□□ -2.22
EFEMP1Q12805 SNORA33.1-201ENST00000364957 130 ntBASIC1.16□□□□□ -2.22
EFEMP1Q12805 RNA5SP484-201ENST00000458857 111 ntBASIC1.16□□□□□ -2.22
EFEMP1Q12805 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
EFEMP1Q12805 SNORD18A-201ENST00000363753 72 ntBASIC1.15□□□□□ -2.23
EFEMP1Q12805 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
EFEMP1Q12805 RNU6-269P-201ENST00000391077 97 ntBASIC1.15□□□□□ -2.23
EFEMP1Q12805 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
EFEMP1Q12805 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
EFEMP1Q12805 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
EFEMP1Q12805 RNU6-753P-201ENST00000363926 107 ntBASIC1.14□□□□□ -2.23
EFEMP1Q12805 SNORD89-201ENST00000390981 114 ntBASIC1.14□□□□□ -2.23
EFEMP1Q12805 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.14□□□□□ -2.23
EFEMP1Q12805 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
EFEMP1Q12805 Y_RNA.125-201ENST00000363371 111 ntBASIC1.13□□□□□ -2.23
EFEMP1Q12805 RNU6-520P-201ENST00000384717 104 ntBASIC1.13□□□□□ -2.23
EFEMP1Q12805 RNA5SP47-201ENST00000517230 109 ntBASIC1.13□□□□□ -2.23
EFEMP1Q12805 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
EFEMP1Q12805 SNORA41B-201ENST00000384785 128 ntBASIC1.12□□□□□ -2.23
EFEMP1Q12805 AC002429.1-201ENST00000437672 148 ntBASIC1.12□□□□□ -2.23
EFEMP1Q12805 MIR6734-201ENST00000621166 68 ntBASIC1.12□□□□□ -2.23
EFEMP1Q12805 uc_338.10-201ENST00000621872 182 ntBASIC1.12□□□□□ -2.23
EFEMP1Q12805 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
EFEMP1Q12805 SNORA63.6-201ENST00000364921 119 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 SNORA15B-2-201ENST00000384058 135 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 SNORD26-201ENST00000384147 75 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 SNORA15B-1-201ENST00000384334 135 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 SNORA8.2-201ENST00000384372 139 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 Y_RNA.540-201ENST00000384638 111 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 SNORD105-201ENST00000386910 85 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 RNU6-1246P-201ENST00000391064 107 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 MIR3678-201ENST00000578455 94 ntBASIC1.11□□□□□ -2.23
EFEMP1Q12805 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
EFEMP1Q12805 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
EFEMP1Q12805 Y_RNA.325-201ENST00000365171 122 ntBASIC1.1□□□□□ -2.23
EFEMP1Q12805 MIR582-201ENST00000365731 98 ntBASIC1.1□□□□□ -2.23
EFEMP1Q12805 MIR652-201ENST00000385278 98 ntBASIC1.1□□□□□ -2.23
EFEMP1Q12805 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
EFEMP1Q12805 Y_RNA.633-201ENST00000459107 95 ntBASIC1.1□□□□□ -2.23
EFEMP1Q12805 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
EFEMP1Q12805 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
EFEMP1Q12805 SNORA9.1-201ENST00000362412 131 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 Y_RNA.246-201ENST00000364495 108 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 U7.7-201ENST00000459276 60 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 SCARNA17.3-201ENST00000516381 125 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 SCARNA16.5-201ENST00000517114 183 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.09□□□□□ -2.23
EFEMP1Q12805 MIR548AE1-201ENST00000583292 70 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 MIR4473-201ENST00000583731 91 ntBASIC1.09□□□□□ -2.23
EFEMP1Q12805 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.24
EFEMP1Q12805 Y_RNA.407-201ENST00000383986 113 ntBASIC1.08□□□□□ -2.24
EFEMP1Q12805 RNU7-119P-201ENST00000459279 63 ntBASIC1.08□□□□□ -2.24
EFEMP1Q12805 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
EFEMP1Q12805 RNU6-231P-201ENST00000517122 103 ntBASIC1.08□□□□□ -2.24
EFEMP1Q12805 MIR3612-201ENST00000579753 87 ntBASIC1.08□□□□□ -2.24
EFEMP1Q12805 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
EFEMP1Q12805 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
EFEMP1Q12805 MIR548E-201ENST00000408287 88 ntBASIC1.07□□□□□ -2.24
EFEMP1Q12805 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.07□□□□□ -2.24
EFEMP1Q12805 AL162376.1-201ENST00000624117 175 ntBASIC1.07□□□□□ -2.24
EFEMP1Q12805 MIR573-201ENST00000384964 99 ntBASIC1.06□□□□□ -2.24
EFEMP1Q12805 MIR150-201ENST00000385048 84 ntBASIC1.06□□□□□ -2.24
EFEMP1Q12805 SNORD116.2-201ENST00000391251 93 ntBASIC1.06□□□□□ -2.24
EFEMP1Q12805 RNA5SP480-201ENST00000516840 109 ntBASIC1.06□□□□□ -2.24
EFEMP1Q12805 RNU6-980P-201ENST00000516925 103 ntBASIC1.06□□□□□ -2.24
EFEMP1Q12805 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
EFEMP1Q12805 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
EFEMP1Q12805 AC006210.1-201ENST00000424882 111 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms