Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-275P-201ENST00000364910 107 ntBASIC-3.25□□□□□ -2.93
HIST1H1AQ02539 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.25□□□□□ -2.93
HIST1H1AQ02539 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.25□□□□□ -2.93
HIST1H1AQ02539 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.25□□□□□ -2.93
HIST1H1AQ02539 MTND3P2-201ENST00000438452 342 ntBASIC-3.25□□□□□ -2.93
HIST1H1AQ02539 RNU6-151P-201ENST00000364158 107 ntBASIC-3.26□□□□□ -2.93
HIST1H1AQ02539 RNU6-806P-201ENST00000365147 105 ntBASIC-3.26□□□□□ -2.93
HIST1H1AQ02539 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.26□□□□□ -2.93
HIST1H1AQ02539 Y_RNA.352-201ENST00000365439 102 ntBASIC-3.26□□□□□ -2.93
HIST1H1AQ02539 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.26□□□□□ -2.93
HIST1H1AQ02539 RNU6-630P-201ENST00000391258 106 ntBASIC-3.26□□□□□ -2.93
HIST1H1AQ02539 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.26□□□□□ -2.93
HIST1H1AQ02539 RNA5SP292-201ENST00000390974 118 ntBASIC-3.27□□□□□ -2.93
HIST1H1AQ02539 RNU6-823P-201ENST00000391042 103 ntBASIC-3.27□□□□□ -2.93
HIST1H1AQ02539 RNU6-415P-201ENST00000516252 97 ntBASIC-3.27□□□□□ -2.93
HIST1H1AQ02539 RNU6-238P-201ENST00000363313 106 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 RNU6-450P-201ENST00000364654 107 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 MIR548I1-201ENST00000408810 149 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 SNORD4B-201ENST00000459083 72 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 Y_RNA.686-201ENST00000516548 134 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 MIR548Z-201ENST00000584743 97 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 U2.14-201ENST00000615943 113 ntBASIC-3.28□□□□□ -2.93
HIST1H1AQ02539 MTND5P22-201ENST00000458380 195 ntBASIC-3.29□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.717-201ENST00000517106 92 ntBASIC-3.29□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.26-201ENST00000362539 101 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.645-201ENST00000391229 102 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 MIR1277-201ENST00000408536 78 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 AC069439.1-201ENST00000494739 167 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 SNORA18.5-201ENST00000516616 101 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 U4.5-201ENST00000617137 123 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 MIR6844-201ENST00000637122 62 ntBASIC-3.3□□□□□ -2.94
HIST1H1AQ02539 RNU5F-1-201ENST00000362507 117 ntBASIC-3.31□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.31□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.279-201ENST00000364763 95 ntBASIC-3.31□□□□□ -2.94
HIST1H1AQ02539 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.31□□□□□ -2.94
HIST1H1AQ02539 RNU6-696P-201ENST00000390834 107 ntBASIC-3.31□□□□□ -2.94
HIST1H1AQ02539 RNY3P16-201ENST00000516338 101 ntBASIC-3.31□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.32□□□□□ -2.94
HIST1H1AQ02539 MIR4748-201ENST00000578076 82 ntBASIC-3.32□□□□□ -2.94
HIST1H1AQ02539 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-3.32□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.33□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.308-201ENST00000365043 101 ntBASIC-3.33□□□□□ -2.94
HIST1H1AQ02539 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.33□□□□□ -2.94
HIST1H1AQ02539 MIR520D-201ENST00000385002 87 ntBASIC-3.33□□□□□ -2.94
HIST1H1AQ02539 RNU6-807P-201ENST00000516805 107 ntBASIC-3.33□□□□□ -2.94
HIST1H1AQ02539 RNU6-493P-201ENST00000391321 108 ntBASIC-3.34□□□□□ -2.94
HIST1H1AQ02539 U6.81-201ENST00000612550 106 ntBASIC-3.34□□□□□ -2.94
HIST1H1AQ02539 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.34□□□□□ -2.94
HIST1H1AQ02539 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.35□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.276-201ENST00000364732 109 ntBASIC-3.35□□□□□ -2.95
HIST1H1AQ02539 RNU6-458P-201ENST00000384179 107 ntBASIC-3.35□□□□□ -2.95
HIST1H1AQ02539 RNU6-101P-201ENST00000410323 104 ntBASIC-3.35□□□□□ -2.95
HIST1H1AQ02539 RNU6-1143P-201ENST00000516125 104 ntBASIC-3.35□□□□□ -2.95
HIST1H1AQ02539 U6.58-201ENST00000613107 107 ntBASIC-3.35□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.384-201ENST00000383909 102 ntBASIC-3.36□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.36□□□□□ -2.95
HIST1H1AQ02539 RNU6-816P-201ENST00000390914 107 ntBASIC-3.36□□□□□ -2.95
HIST1H1AQ02539 RNU6-644P-201ENST00000391155 98 ntBASIC-3.36□□□□□ -2.95
HIST1H1AQ02539 RNU6-1268P-201ENST00000391214 107 ntBASIC-3.36□□□□□ -2.95
HIST1H1AQ02539 RNU6-1239P-201ENST00000391310 107 ntBASIC-3.36□□□□□ -2.95
HIST1H1AQ02539 U2.7-201ENST00000619197 100 ntBASIC-3.36□□□□□ -2.95
HIST1H1AQ02539 SNORD115-31-201ENST00000365318 82 ntBASIC-3.37□□□□□ -2.95
HIST1H1AQ02539 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.37□□□□□ -2.95
HIST1H1AQ02539 MIR3646-201ENST00000578301 84 ntBASIC-3.37□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.37□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.38□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.38□□□□□ -2.95
HIST1H1AQ02539 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.38□□□□□ -2.95
HIST1H1AQ02539 RNU6-766P-201ENST00000362478 107 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.237-201ENST00000364439 102 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 AL118496.2-201ENST00000448300 230 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 snoU13.10-201ENST00000459301 103 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 RNU6-277P-201ENST00000516272 106 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 MIR548W-201ENST00000581970 74 ntBASIC-3.39□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.4□□□□□ -2.95
HIST1H1AQ02539 MIR577-201ENST00000385196 96 ntBASIC-3.4□□□□□ -2.95
HIST1H1AQ02539 RNU6-519P-201ENST00000410590 108 ntBASIC-3.4□□□□□ -2.95
HIST1H1AQ02539 RNA5SP136-201ENST00000410906 107 ntBASIC-3.4□□□□□ -2.95
HIST1H1AQ02539 AL035461.1-201ENST00000421490 332 ntBASIC-3.4□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.4□□□□□ -2.95
HIST1H1AQ02539 Y_RNA.153-201ENST00000363615 91 ntBASIC-3.41□□□□□ -2.96
HIST1H1AQ02539 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.41□□□□□ -2.96
HIST1H1AQ02539 MTND1P19-201ENST00000511780 315 ntBASIC-3.41□□□□□ -2.96
HIST1H1AQ02539 RNU6-718P-201ENST00000516166 105 ntBASIC-3.41□□□□□ -2.96
HIST1H1AQ02539 RNU6-861P-201ENST00000516745 106 ntBASIC-3.41□□□□□ -2.96
HIST1H1AQ02539 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.41□□□□□ -2.96
HIST1H1AQ02539 RNU6-832P-201ENST00000363319 107 ntBASIC-3.42□□□□□ -2.96
HIST1H1AQ02539 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.42□□□□□ -2.96
HIST1H1AQ02539 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.42□□□□□ -2.96
HIST1H1AQ02539 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-3.42□□□□□ -2.96
HIST1H1AQ02539 RNU6-752P-201ENST00000516376 102 ntBASIC-3.42□□□□□ -2.96
HIST1H1AQ02539 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.42□□□□□ -2.96
HIST1H1AQ02539 FTX_4.1-201ENST00000616291 147 ntBASIC-3.42□□□□□ -2.96
HIST1H1AQ02539 RNU6-656P-201ENST00000516785 107 ntBASIC-3.43□□□□□ -2.96
HIST1H1AQ02539 Y_RNA.210-201ENST00000364161 110 ntBASIC-3.45□□□□□ -2.96
HIST1H1AQ02539 MIR1263-201ENST00000408324 86 ntBASIC-3.45□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms