Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AL162376.1-201ENST00000624117 175 ntBASIC0.83□□□□□ -2.28
CLK3P49761 AC073869.9-201ENST00000641610 120 ntBASIC0.83□□□□□ -2.28
CLK3P49761 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
CLK3P49761 MIR203A-201ENST00000384836 110 ntBASIC0.82□□□□□ -2.28
CLK3P49761 RNA5SP227-201ENST00000516184 113 ntBASIC0.82□□□□□ -2.28
CLK3P49761 RNA5SP102-201ENST00000516865 106 ntBASIC0.82□□□□□ -2.28
CLK3P49761 MIR3657-201ENST00000584818 117 ntBASIC0.82□□□□□ -2.28
CLK3P49761 AC069503.3-201ENST00000618674 145 ntBASIC0.82□□□□□ -2.28
CLK3P49761 SNORD114-27-201ENST00000363766 70 ntBASIC0.81□□□□□ -2.28
CLK3P49761 SNORD114-4-201ENST00000363962 75 ntBASIC0.81□□□□□ -2.28
CLK3P49761 RNA5SP484-201ENST00000458857 111 ntBASIC0.81□□□□□ -2.28
CLK3P49761 SNORA2.1-201ENST00000363089 137 ntBASIC0.8□□□□□ -2.28
CLK3P49761 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
CLK3P49761 MTND4LP1-201ENST00000446263 157 ntBASIC0.8□□□□□ -2.28
CLK3P49761 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
CLK3P49761 RNU6-982P-201ENST00000516216 102 ntBASIC0.8□□□□□ -2.28
CLK3P49761 RNA5SP268-201ENST00000516828 124 ntBASIC0.8□□□□□ -2.28
CLK3P49761 RNA5SP94-201ENST00000516917 108 ntBASIC0.8□□□□□ -2.28
CLK3P49761 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
CLK3P49761 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CLK3P49761 Y_RNA.164-201ENST00000363709 102 ntBASIC0.79□□□□□ -2.28
CLK3P49761 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
CLK3P49761 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
CLK3P49761 RNU5B-6P-201ENST00000516765 68 ntBASIC0.78□□□□□ -2.28
CLK3P49761 AC018659.1-201ENST00000551083 169 ntBASIC0.78□□□□□ -2.28
CLK3P49761 AC103706.3-201ENST00000636297 85 ntBASIC0.78□□□□□ -2.28
CLK3P49761 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
CLK3P49761 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CLK3P49761 SNORA40.17-201ENST00000517256 115 ntBASIC0.77□□□□□ -2.29
CLK3P49761 MIR4511-201ENST00000582784 87 ntBASIC0.77□□□□□ -2.29
CLK3P49761 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
CLK3P49761 RNU6-668P-201ENST00000364180 107 ntBASIC0.76□□□□□ -2.29
CLK3P49761 RNU6-990P-201ENST00000364385 104 ntBASIC0.76□□□□□ -2.29
CLK3P49761 Y_RNA.250-201ENST00000364542 110 ntBASIC0.76□□□□□ -2.29
CLK3P49761 RNU6-645P-201ENST00000364649 106 ntBASIC0.76□□□□□ -2.29
CLK3P49761 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
CLK3P49761 RNA5SP222-201ENST00000411039 105 ntBASIC0.76□□□□□ -2.29
CLK3P49761 MIR7107-201ENST00000611489 80 ntBASIC0.76□□□□□ -2.29
CLK3P49761 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
CLK3P49761 MIR1276-201ENST00000408707 83 ntBASIC0.75□□□□□ -2.29
CLK3P49761 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
CLK3P49761 MIR8070-201ENST00000616510 88 ntBASIC0.75□□□□□ -2.29
CLK3P49761 MIR6739-201ENST00000622461 75 ntBASIC0.75□□□□□ -2.29
CLK3P49761 Y_RNA.407-201ENST00000383986 113 ntBASIC0.74□□□□□ -2.29
CLK3P49761 SNORD110-201ENST00000408189 75 ntBASIC0.74□□□□□ -2.29
CLK3P49761 AC006210.1-201ENST00000424882 111 ntBASIC0.74□□□□□ -2.29
CLK3P49761 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.74□□□□□ -2.29
CLK3P49761 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
CLK3P49761 RNA5SP147-201ENST00000516493 109 ntBASIC0.73□□□□□ -2.29
CLK3P49761 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
CLK3P49761 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
CLK3P49761 MIR96-201ENST00000362288 78 ntBASIC0.72□□□□□ -2.29
CLK3P49761 Y_RNA.375-201ENST00000365625 101 ntBASIC0.72□□□□□ -2.29
CLK3P49761 SCARNA17.3-201ENST00000516381 125 ntBASIC0.72□□□□□ -2.29
CLK3P49761 RNU6-656P-201ENST00000516785 107 ntBASIC0.72□□□□□ -2.29
CLK3P49761 AL109933.3-201ENST00000619095 188 ntBASIC0.72□□□□□ -2.29
CLK3P49761 RNU1-93P-201ENST00000364704 169 ntBASIC0.71□□□□□ -2.3
CLK3P49761 RNU6-1162P-201ENST00000384443 104 ntBASIC0.71□□□□□ -2.3
CLK3P49761 MIR652-201ENST00000385278 98 ntBASIC0.71□□□□□ -2.3
CLK3P49761 RNU6-542P-201ENST00000516405 103 ntBASIC0.71□□□□□ -2.3
CLK3P49761 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
CLK3P49761 MIR521-2-201ENST00000384818 87 ntBASIC0.7□□□□□ -2.3
CLK3P49761 MIR140-201ENST00000385282 100 ntBASIC0.7□□□□□ -2.3
CLK3P49761 MIR5706-201ENST00000579841 80 ntBASIC0.7□□□□□ -2.3
CLK3P49761 MIR4452-201ENST00000583004 71 ntBASIC0.7□□□□□ -2.3
CLK3P49761 RNA5SP215-201ENST00000363440 122 ntBASIC0.69□□□□□ -2.3
CLK3P49761 RNA5SP517-201ENST00000364724 117 ntBASIC0.69□□□□□ -2.3
CLK3P49761 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
CLK3P49761 RNU6-669P-201ENST00000365575 107 ntBASIC0.69□□□□□ -2.3
CLK3P49761 MIR9-2-201ENST00000384838 87 ntBASIC0.69□□□□□ -2.3
CLK3P49761 MIR499A-201ENST00000384903 122 ntBASIC0.69□□□□□ -2.3
CLK3P49761 Y_RNA.676-201ENST00000516393 96 ntBASIC0.69□□□□□ -2.3
CLK3P49761 MIR548AE1-201ENST00000583292 70 ntBASIC0.69□□□□□ -2.3
CLK3P49761 MIR4473-201ENST00000583731 91 ntBASIC0.69□□□□□ -2.3
CLK3P49761 SNORA70.25-201ENST00000612741 95 ntBASIC0.69□□□□□ -2.3
CLK3P49761 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
CLK3P49761 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
CLK3P49761 MIR373-201ENST00000362273 69 ntBASIC0.68□□□□□ -2.3
CLK3P49761 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
CLK3P49761 SNORA15B-2-201ENST00000384058 135 ntBASIC0.68□□□□□ -2.3
CLK3P49761 SNORA15B-1-201ENST00000384334 135 ntBASIC0.68□□□□□ -2.3
CLK3P49761 AC110620.1-201ENST00000416042 228 ntBASIC0.68□□□□□ -2.3
CLK3P49761 Y_RNA.633-201ENST00000459107 95 ntBASIC0.68□□□□□ -2.3
CLK3P49761 AC021146.9-201ENST00000512503 156 ntBASIC0.68□□□□□ -2.3
CLK3P49761 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
CLK3P49761 AC092634.7-201ENST00000621022 103 ntBASIC0.68□□□□□ -2.3
CLK3P49761 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.68□□□□□ -2.3
CLK3P49761 MIR520E-201ENST00000384867 87 ntBASIC0.67□□□□□ -2.3
CLK3P49761 RNU6-1089P-201ENST00000516473 104 ntBASIC0.67□□□□□ -2.3
CLK3P49761 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
CLK3P49761 uc_338.10-201ENST00000621872 182 ntBASIC0.67□□□□□ -2.3
CLK3P49761 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
CLK3P49761 SNORA63.6-201ENST00000364921 119 ntBASIC0.66□□□□□ -2.3
CLK3P49761 SNORA40.8-201ENST00000411034 126 ntBASIC0.66□□□□□ -2.3
CLK3P49761 AC069271.1-201ENST00000445577 156 ntBASIC0.66□□□□□ -2.3
CLK3P49761 snoU13.13-201ENST00000458842 104 ntBASIC0.66□□□□□ -2.3
CLK3P49761 RNU1-29P-201ENST00000606574 126 ntBASIC0.66□□□□□ -2.3
CLK3P49761 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CLK3P49761 HMGN2P22-201ENST00000427588 175 ntBASIC0.65□□□□□ -2.31
CLK3P49761 AL157398.1-201ENST00000452981 186 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms