Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ATP6V1AP38606 Y_RNA.236-201ENST00000364427 111 ntBASIC1.75□□□□□ -2.13
ATP6V1AP38606 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ATP6V1AP38606 RNU6-269P-201ENST00000391077 97 ntBASIC1.75□□□□□ -2.13
ATP6V1AP38606 Y_RNA.250-201ENST00000364542 110 ntBASIC1.74□□□□□ -2.13
ATP6V1AP38606 SNORA8.2-201ENST00000384372 139 ntBASIC1.74□□□□□ -2.13
ATP6V1AP38606 RNU6-1162P-201ENST00000384443 104 ntBASIC1.74□□□□□ -2.13
ATP6V1AP38606 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.73□□□□□ -2.13
ATP6V1AP38606 MIR3612-201ENST00000579753 87 ntBASIC1.73□□□□□ -2.13
ATP6V1AP38606 MIR548V-201ENST00000584165 80 ntBASIC1.73□□□□□ -2.13
ATP6V1AP38606 RNU6-302P-201ENST00000365249 107 ntBASIC1.72□□□□□ -2.13
ATP6V1AP38606 MIR548C-201ENST00000384815 97 ntBASIC1.72□□□□□ -2.13
ATP6V1AP38606 MIR3660-201ENST00000584845 100 ntBASIC1.72□□□□□ -2.13
ATP6V1AP38606 Y_RNA.540-201ENST00000384638 111 ntBASIC1.71□□□□□ -2.14
ATP6V1AP38606 MIR573-201ENST00000384964 99 ntBASIC1.71□□□□□ -2.14
ATP6V1AP38606 snoU13.13-201ENST00000458842 104 ntBASIC1.71□□□□□ -2.14
ATP6V1AP38606 RNA5SP484-201ENST00000458857 111 ntBASIC1.71□□□□□ -2.14
ATP6V1AP38606 SCARNA16.5-201ENST00000517114 183 ntBASIC1.71□□□□□ -2.14
ATP6V1AP38606 RNU6-92P-201ENST00000605893 104 ntBASIC1.71□□□□□ -2.14
ATP6V1AP38606 MIR521-2-201ENST00000384818 87 ntBASIC1.7□□□□□ -2.14
ATP6V1AP38606 MIR320A-201ENST00000385302 82 ntBASIC1.7□□□□□ -2.14
ATP6V1AP38606 AL157398.1-201ENST00000452981 186 ntBASIC1.7□□□□□ -2.14
ATP6V1AP38606 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.7□□□□□ -2.14
ATP6V1AP38606 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
ATP6V1AP38606 RNU1-93P-201ENST00000364704 169 ntBASIC1.69□□□□□ -2.14
ATP6V1AP38606 RNU6-955P-201ENST00000410497 104 ntBASIC1.69□□□□□ -2.14
ATP6V1AP38606 SNORD114-27-201ENST00000363766 70 ntBASIC1.68□□□□□ -2.14
ATP6V1AP38606 MIR19B1-201ENST00000384829 87 ntBASIC1.68□□□□□ -2.14
ATP6V1AP38606 RNU6-122P-201ENST00000516818 107 ntBASIC1.68□□□□□ -2.14
ATP6V1AP38606 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.68□□□□□ -2.14
ATP6V1AP38606 SNORD124-201ENST00000459577 104 ntBASIC1.67□□□□□ -2.14
ATP6V1AP38606 MIR200A-201ENST00000384875 90 ntBASIC1.66□□□□□ -2.14
ATP6V1AP38606 MIR630-201ENST00000384957 97 ntBASIC1.66□□□□□ -2.14
ATP6V1AP38606 MIR3938-201ENST00000582157 103 ntBASIC1.66□□□□□ -2.14
ATP6V1AP38606 AC022709.1-201ENST00000615967 87 ntBASIC1.66□□□□□ -2.14
ATP6V1AP38606 RNU6-446P-201ENST00000362827 106 ntBASIC1.65□□□□□ -2.15
ATP6V1AP38606 MIR520E-201ENST00000384867 87 ntBASIC1.65□□□□□ -2.15
ATP6V1AP38606 AC021146.9-201ENST00000512503 156 ntBASIC1.65□□□□□ -2.15
ATP6V1AP38606 AC025627.3-201ENST00000582078 182 ntBASIC1.65□□□□□ -2.15
ATP6V1AP38606 MIR7974-201ENST00000615835 79 ntBASIC1.65□□□□□ -2.15
ATP6V1AP38606 AL162376.1-201ENST00000624117 175 ntBASIC1.65□□□□□ -2.15
ATP6V1AP38606 SNORA75.1-201ENST00000391130 148 ntBASIC1.64□□□□□ -2.15
ATP6V1AP38606 RPS29P1-201ENST00000465274 159 ntBASIC1.63□□□□□ -2.15
ATP6V1AP38606 RNA5SP227-201ENST00000516184 113 ntBASIC1.63□□□□□ -2.15
ATP6V1AP38606 MIR6828-201ENST00000636181 60 ntBASIC1.63□□□□□ -2.15
ATP6V1AP38606 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
ATP6V1AP38606 SNORD60.1-201ENST00000362451 73 ntBASIC1.61□□□□□ -2.15
ATP6V1AP38606 SNORA15B-2-201ENST00000384058 135 ntBASIC1.61□□□□□ -2.15
ATP6V1AP38606 SNORA15B-1-201ENST00000384334 135 ntBASIC1.61□□□□□ -2.15
ATP6V1AP38606 MIR758-201ENST00000390227 88 ntBASIC1.61□□□□□ -2.15
ATP6V1AP38606 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
ATP6V1AP38606 RNA5SP480-201ENST00000516840 109 ntBASIC1.61□□□□□ -2.15
ATP6V1AP38606 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.61□□□□□ -2.15
ATP6V1AP38606 Y_RNA.407-201ENST00000383986 113 ntBASIC1.6□□□□□ -2.15
ATP6V1AP38606 MIR517B-201ENST00000385102 67 ntBASIC1.6□□□□□ -2.15
ATP6V1AP38606 MIR652-201ENST00000385278 98 ntBASIC1.6□□□□□ -2.15
ATP6V1AP38606 RPS29P23-201ENST00000458635 123 ntBASIC1.6□□□□□ -2.15
ATP6V1AP38606 SCARNA17.3-201ENST00000516381 125 ntBASIC1.6□□□□□ -2.15
ATP6V1AP38606 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.6□□□□□ -2.15
ATP6V1AP38606 MIR6515-201ENST00000619843 57 ntBASIC1.6□□□□□ -2.15
ATP6V1AP38606 MIR6767-201ENST00000637302 66 ntBASIC1.6□□□□□ -2.15
ATP6V1AP38606 SNORD113-2-201ENST00000391082 72 ntBASIC1.59□□□□□ -2.15
ATP6V1AP38606 Y_RNA.633-201ENST00000459107 95 ntBASIC1.59□□□□□ -2.15
ATP6V1AP38606 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.59□□□□□ -2.15
ATP6V1AP38606 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
ATP6V1AP38606 MIR150-201ENST00000385048 84 ntBASIC1.58□□□□□ -2.16
ATP6V1AP38606 Y_RNA.722-201ENST00000517279 114 ntBASIC1.58□□□□□ -2.16
ATP6V1AP38606 AC011195.1-201ENST00000578177 177 ntBASIC1.58□□□□□ -2.16
ATP6V1AP38606 U2.7-201ENST00000619197 100 ntBASIC1.58□□□□□ -2.16
ATP6V1AP38606 uc_338.10-201ENST00000621872 182 ntBASIC1.58□□□□□ -2.16
ATP6V1AP38606 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
ATP6V1AP38606 MIR18A-201ENST00000362310 71 ntBASIC1.57□□□□□ -2.16
ATP6V1AP38606 RNU6-698P-201ENST00000363523 107 ntBASIC1.57□□□□□ -2.16
ATP6V1AP38606 RNU6-34P-201ENST00000364874 107 ntBASIC1.57□□□□□ -2.16
ATP6V1AP38606 SNORA33.1-201ENST00000364957 130 ntBASIC1.57□□□□□ -2.16
ATP6V1AP38606 AC006210.1-201ENST00000424882 111 ntBASIC1.57□□□□□ -2.16
ATP6V1AP38606 MIR7978-201ENST00000636158 59 ntBASIC1.57□□□□□ -2.16
ATP6V1AP38606 Y_RNA.125-201ENST00000363371 111 ntBASIC1.56□□□□□ -2.16
ATP6V1AP38606 SNORA63.6-201ENST00000364921 119 ntBASIC1.56□□□□□ -2.16
ATP6V1AP38606 SNORD114-24-201ENST00000365029 72 ntBASIC1.56□□□□□ -2.16
ATP6V1AP38606 SNORD110-201ENST00000408189 75 ntBASIC1.56□□□□□ -2.16
ATP6V1AP38606 RNU7-174P-201ENST00000516248 59 ntBASIC1.56□□□□□ -2.16
ATP6V1AP38606 RNA5SP268-201ENST00000516828 124 ntBASIC1.56□□□□□ -2.16
ATP6V1AP38606 MIR4473-201ENST00000583731 91 ntBASIC1.56□□□□□ -2.16
ATP6V1AP38606 SNORA36.1-201ENST00000363424 132 ntBASIC1.55□□□□□ -2.16
ATP6V1AP38606 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ATP6V1AP38606 SNORD99-201ENST00000408612 74 ntBASIC1.55□□□□□ -2.16
ATP6V1AP38606 RNA5SP255-201ENST00000516370 107 ntBASIC1.55□□□□□ -2.16
ATP6V1AP38606 MIR548AE1-201ENST00000583292 70 ntBASIC1.55□□□□□ -2.16
ATP6V1AP38606 MIR6788-201ENST00000618842 66 ntBASIC1.55□□□□□ -2.16
ATP6V1AP38606 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ATP6V1AP38606 RNU6-1223P-201ENST00000517124 104 ntBASIC1.54□□□□□ -2.16
ATP6V1AP38606 PVT1_3.1-201ENST00000620853 95 ntBASIC1.54□□□□□ -2.16
ATP6V1AP38606 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
ATP6V1AP38606 SNORD113-4-201ENST00000364802 75 ntBASIC1.53□□□□□ -2.16
ATP6V1AP38606 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
ATP6V1AP38606 MIR548J-201ENST00000408833 112 ntBASIC1.53□□□□□ -2.16
ATP6V1AP38606 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
ATP6V1AP38606 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
ATP6V1AP38606 MIR151B-201ENST00000584249 96 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms