Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR6086-201ENST00000638065 55 ntBASIC1.44□□□□□ -2.18
RXRBP28702 SNORD28-201ENST00000384706 75 ntBASIC1.43□□□□□ -2.18
RXRBP28702 SNORD41.1-201ENST00000391000 69 ntBASIC1.43□□□□□ -2.18
RXRBP28702 MIR936-201ENST00000401264 98 ntBASIC1.43□□□□□ -2.18
RXRBP28702 AC067940.1-201ENST00000458411 300 ntBASIC1.43□□□□□ -2.18
RXRBP28702 MIR4714-201ENST00000580728 77 ntBASIC1.43□□□□□ -2.18
RXRBP28702 AC067863.3-201ENST00000624172 122 ntBASIC1.43□□□□□ -2.18
RXRBP28702 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
RXRBP28702 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
RXRBP28702 MIR216B-201ENST00000390186 82 ntBASIC1.42□□□□□ -2.18
RXRBP28702 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RXRBP28702 AC098934.3-201ENST00000430450 190 ntBASIC1.42□□□□□ -2.18
RXRBP28702 AC244669.1-204ENST00000621564 178 ntBASIC1.42□□□□□ -2.18
RXRBP28702 MIR19B1-201ENST00000384829 87 ntBASIC1.41□□□□□ -2.18
RXRBP28702 MIR203A-201ENST00000384836 110 ntBASIC1.41□□□□□ -2.18
RXRBP28702 MIR4639-201ENST00000584938 69 ntBASIC1.41□□□□□ -2.18
RXRBP28702 MIR6509-201ENST00000614603 85 ntBASIC1.41□□□□□ -2.18
RXRBP28702 RNU6-1187P-201ENST00000364771 110 ntBASIC1.4□□□□□ -2.19
RXRBP28702 RNU6-1110P-201ENST00000516462 101 ntBASIC1.4□□□□□ -2.19
RXRBP28702 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
RXRBP28702 AL627230.5-201ENST00000619807 58 ntBASIC1.4□□□□□ -2.19
RXRBP28702 MIR330-201ENST00000362196 94 ntBASIC1.39□□□□□ -2.19
RXRBP28702 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
RXRBP28702 SNORD18A-201ENST00000363753 72 ntBASIC1.39□□□□□ -2.19
RXRBP28702 RNU6-726P-201ENST00000364680 107 ntBASIC1.39□□□□□ -2.19
RXRBP28702 RNU6V-201ENST00000384105 107 ntBASIC1.39□□□□□ -2.19
RXRBP28702 MIR532-201ENST00000385025 91 ntBASIC1.39□□□□□ -2.19
RXRBP28702 SNORD89-201ENST00000390981 114 ntBASIC1.39□□□□□ -2.19
RXRBP28702 AC110620.1-201ENST00000416042 228 ntBASIC1.39□□□□□ -2.19
RXRBP28702 MIR3657-201ENST00000584818 117 ntBASIC1.39□□□□□ -2.19
RXRBP28702 AC103706.3-201ENST00000636297 85 ntBASIC1.39□□□□□ -2.19
RXRBP28702 AC073869.9-201ENST00000641610 120 ntBASIC1.39□□□□□ -2.19
RXRBP28702 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
RXRBP28702 RNA5SP117-201ENST00000365294 118 ntBASIC1.38□□□□□ -2.19
RXRBP28702 SNORD105-201ENST00000386910 85 ntBASIC1.38□□□□□ -2.19
RXRBP28702 RNA5SP47-201ENST00000517230 109 ntBASIC1.38□□□□□ -2.19
RXRBP28702 RNU6-669P-201ENST00000365575 107 ntBASIC1.37□□□□□ -2.19
RXRBP28702 MT-TY-201ENST00000387409 66 ntBASIC1.37□□□□□ -2.19
RXRBP28702 RNU6-135P-201ENST00000516769 101 ntBASIC1.37□□□□□ -2.19
RXRBP28702 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
RXRBP28702 RNU6-1335P-201ENST00000365426 107 ntBASIC1.36□□□□□ -2.19
RXRBP28702 MIR1197-201ENST00000408818 88 ntBASIC1.36□□□□□ -2.19
RXRBP28702 SNORD114-21-201ENST00000606412 72 ntBASIC1.36□□□□□ -2.19
RXRBP28702 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
RXRBP28702 RNU6-260P-201ENST00000384092 107 ntBASIC1.35□□□□□ -2.19
RXRBP28702 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
RXRBP28702 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
RXRBP28702 U7.7-201ENST00000459276 60 ntBASIC1.35□□□□□ -2.19
RXRBP28702 RNU6-990P-201ENST00000364385 104 ntBASIC1.34□□□□□ -2.19
RXRBP28702 RNU6-499P-201ENST00000365615 107 ntBASIC1.34□□□□□ -2.19
RXRBP28702 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
RXRBP28702 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
RXRBP28702 SNORD124-201ENST00000459577 104 ntBASIC1.34□□□□□ -2.19
RXRBP28702 RNU1-141P-201ENST00000364623 158 ntBASIC1.33□□□□□ -2.2
RXRBP28702 Y_RNA.375-201ENST00000365625 101 ntBASIC1.33□□□□□ -2.2
RXRBP28702 MIR573-201ENST00000384964 99 ntBASIC1.33□□□□□ -2.2
RXRBP28702 MIR3678-201ENST00000578455 94 ntBASIC1.33□□□□□ -2.2
RXRBP28702 RNU4-38P-201ENST00000364472 129 ntBASIC1.32□□□□□ -2.2
RXRBP28702 RNU6-645P-201ENST00000364649 106 ntBASIC1.32□□□□□ -2.2
RXRBP28702 RNU6-269P-201ENST00000391077 97 ntBASIC1.32□□□□□ -2.2
RXRBP28702 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
RXRBP28702 RNU7-74P-201ENST00000459104 62 ntBASIC1.32□□□□□ -2.2
RXRBP28702 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.32□□□□□ -2.2
RXRBP28702 RNU6-656P-201ENST00000516785 107 ntBASIC1.31□□□□□ -2.2
RXRBP28702 MIR3612-201ENST00000579753 87 ntBASIC1.31□□□□□ -2.2
RXRBP28702 AC069503.3-201ENST00000618674 145 ntBASIC1.31□□□□□ -2.2
RXRBP28702 SNORA2.1-201ENST00000363089 137 ntBASIC1.3□□□□□ -2.2
RXRBP28702 MTND4LP1-201ENST00000446263 157 ntBASIC1.3□□□□□ -2.2
RXRBP28702 RNU6-469P-201ENST00000516253 101 ntBASIC1.3□□□□□ -2.2
RXRBP28702 AC018659.1-201ENST00000551083 169 ntBASIC1.3□□□□□ -2.2
RXRBP28702 RNU6-668P-201ENST00000364180 107 ntBASIC1.29□□□□□ -2.2
RXRBP28702 MTND4LP19-201ENST00000403051 166 ntBASIC1.29□□□□□ -2.2
RXRBP28702 SCARNA16.5-201ENST00000517114 183 ntBASIC1.29□□□□□ -2.2
RXRBP28702 RNA5SP404-201ENST00000517118 132 ntBASIC1.29□□□□□ -2.2
RXRBP28702 MIR4698-201ENST00000577795 80 ntBASIC1.29□□□□□ -2.2
RXRBP28702 MIR4460-201ENST00000577862 86 ntBASIC1.29□□□□□ -2.2
RXRBP28702 MIR6828-201ENST00000636181 60 ntBASIC1.29□□□□□ -2.2
RXRBP28702 SNORA8.2-201ENST00000384372 139 ntBASIC1.28□□□□□ -2.2
RXRBP28702 RNA5SP484-201ENST00000458857 111 ntBASIC1.28□□□□□ -2.2
RXRBP28702 MIR6739-201ENST00000622461 75 ntBASIC1.28□□□□□ -2.2
RXRBP28702 AL162376.1-201ENST00000624117 175 ntBASIC1.28□□□□□ -2.2
RXRBP28702 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
RXRBP28702 RNA5SP193-201ENST00000410353 107 ntBASIC1.27□□□□□ -2.21
RXRBP28702 RNA5SP147-201ENST00000516493 109 ntBASIC1.27□□□□□ -2.21
RXRBP28702 RNU5B-6P-201ENST00000516765 68 ntBASIC1.27□□□□□ -2.21
RXRBP28702 AC092634.7-201ENST00000621022 103 ntBASIC1.27□□□□□ -2.21
RXRBP28702 SNORA36.1-201ENST00000363424 132 ntBASIC1.26□□□□□ -2.21
RXRBP28702 RNU6-987P-201ENST00000384759 104 ntBASIC1.26□□□□□ -2.21
RXRBP28702 MIR633-201ENST00000384821 98 ntBASIC1.26□□□□□ -2.21
RXRBP28702 MIR548L-201ENST00000408303 86 ntBASIC1.26□□□□□ -2.21
RXRBP28702 RNU6-542P-201ENST00000516405 103 ntBASIC1.26□□□□□ -2.21
RXRBP28702 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
RXRBP28702 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
RXRBP28702 RNU4-37P-201ENST00000410214 84 ntBASIC1.24□□□□□ -2.21
RXRBP28702 AC079150.2-201ENST00000443733 78 ntBASIC1.24□□□□□ -2.21
RXRBP28702 RNA5SP255-201ENST00000516370 107 ntBASIC1.24□□□□□ -2.21
RXRBP28702 AC025627.3-201ENST00000582078 182 ntBASIC1.24□□□□□ -2.21
RXRBP28702 MIR4711-201ENST00000578274 70 ntBASIC1.23□□□□□ -2.21
RXRBP28702 MIR2909-201ENST00000617113 69 ntBASIC1.23□□□□□ -2.21
RXRBP28702 MIR18A-201ENST00000362310 71 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms