Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL513043.2-201ENST00000573941 143 ntBASIC-1.21□□□□□ -2.6
USF1P22415 U4.2-201ENST00000618561 85 ntBASIC-1.21□□□□□ -2.6
USF1P22415 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.22□□□□□ -2.6
USF1P22415 MIR577-201ENST00000385196 96 ntBASIC-1.22□□□□□ -2.6
USF1P22415 SNORD75.2-201ENST00000408784 58 ntBASIC-1.22□□□□□ -2.6
USF1P22415 MIR3064-201ENST00000581130 66 ntBASIC-1.22□□□□□ -2.6
USF1P22415 AL353803.5-201ENST00000599815 141 ntBASIC-1.22□□□□□ -2.6
USF1P22415 AL445584.3-201ENST00000617173 78 ntBASIC-1.22□□□□□ -2.6
USF1P22415 MIR6888-201ENST00000621977 67 ntBASIC-1.22□□□□□ -2.6
USF1P22415 U6.96-201ENST00000636425 70 ntBASIC-1.22□□□□□ -2.6
USF1P22415 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.23□□□□□ -2.61
USF1P22415 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.23□□□□□ -2.61
USF1P22415 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.23□□□□□ -2.61
USF1P22415 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.23□□□□□ -2.61
USF1P22415 MIR513C-201ENST00000401352 84 ntBASIC-1.23□□□□□ -2.61
USF1P22415 AP001340.1-201ENST00000624405 217 ntBASIC-1.23□□□□□ -2.61
USF1P22415 AC132825.6-201ENST00000638861 357 ntBASIC-1.23□□□□□ -2.61
USF1P22415 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.24□□□□□ -2.61
USF1P22415 RNU6-151P-201ENST00000364158 107 ntBASIC-1.24□□□□□ -2.61
USF1P22415 HLA-S-202ENST00000425174 53 ntBASIC-1.24□□□□□ -2.61
USF1P22415 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.24□□□□□ -2.61
USF1P22415 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.24□□□□□ -2.61
USF1P22415 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.24□□□□□ -2.61
USF1P22415 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.24□□□□□ -2.61
USF1P22415 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.25□□□□□ -2.61
USF1P22415 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.25□□□□□ -2.61
USF1P22415 MIR548A1-201ENST00000385041 97 ntBASIC-1.25□□□□□ -2.61
USF1P22415 MIR889-201ENST00000401280 79 ntBASIC-1.25□□□□□ -2.61
USF1P22415 AL158147.1-201ENST00000443970 75 ntBASIC-1.25□□□□□ -2.61
USF1P22415 AC068339.1-201ENST00000526965 141 ntBASIC-1.25□□□□□ -2.61
USF1P22415 AC138207.3-201ENST00000585289 166 ntBASIC-1.25□□□□□ -2.61
USF1P22415 AC104996.3-201ENST00000590718 94 ntBASIC-1.25□□□□□ -2.61
USF1P22415 RNU6-226P-201ENST00000363778 107 ntBASIC-1.26□□□□□ -2.61
USF1P22415 RNU2-51P-201ENST00000410708 197 ntBASIC-1.26□□□□□ -2.61
USF1P22415 MIR4694-201ENST00000578534 80 ntBASIC-1.26□□□□□ -2.61
USF1P22415 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.27□□□□□ -2.61
USF1P22415 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.27□□□□□ -2.61
USF1P22415 MIR548U-201ENST00000390728 81 ntBASIC-1.27□□□□□ -2.61
USF1P22415 SNORD90-201ENST00000391145 111 ntBASIC-1.27□□□□□ -2.61
USF1P22415 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.27□□□□□ -2.61
USF1P22415 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
USF1P22415 MIR5591-201ENST00000578248 65 ntBASIC-1.27□□□□□ -2.61
USF1P22415 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.27□□□□□ -2.61
USF1P22415 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.27□□□□□ -2.61
USF1P22415 MIR6129-201ENST00000616087 109 ntBASIC-1.27□□□□□ -2.61
USF1P22415 RNU6-832P-201ENST00000363319 107 ntBASIC-1.28□□□□□ -2.61
USF1P22415 MIR1285-2-201ENST00000408311 88 ntBASIC-1.28□□□□□ -2.61
USF1P22415 AL118496.2-201ENST00000448300 230 ntBASIC-1.28□□□□□ -2.61
USF1P22415 snoU13.17-201ENST00000458802 104 ntBASIC-1.28□□□□□ -2.61
USF1P22415 SNORD4B-201ENST00000459083 72 ntBASIC-1.28□□□□□ -2.61
USF1P22415 RNU6-861P-201ENST00000516745 106 ntBASIC-1.28□□□□□ -2.61
USF1P22415 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.28□□□□□ -2.61
USF1P22415 RNU6-158P-201ENST00000517104 100 ntBASIC-1.28□□□□□ -2.61
USF1P22415 MIR3613-201ENST00000579844 87 ntBASIC-1.28□□□□□ -2.61
USF1P22415 MIR365A-201ENST00000362260 87 ntBASIC-1.29□□□□□ -2.62
USF1P22415 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.29□□□□□ -2.62
USF1P22415 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.29□□□□□ -2.62
USF1P22415 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.29□□□□□ -2.62
USF1P22415 RNU7-120P-201ENST00000459334 63 ntBASIC-1.29□□□□□ -2.62
USF1P22415 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.29□□□□□ -2.62
USF1P22415 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.3□□□□□ -2.62
USF1P22415 SNORA33.1-201ENST00000364957 130 ntBASIC-1.3□□□□□ -2.62
USF1P22415 MIR527-201ENST00000385244 85 ntBASIC-1.3□□□□□ -2.62
USF1P22415 RNU6-644P-201ENST00000391155 98 ntBASIC-1.3□□□□□ -2.62
USF1P22415 U7.2-201ENST00000607576 63 ntBASIC-1.3□□□□□ -2.62
USF1P22415 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.3□□□□□ -2.62
USF1P22415 RNY3P2-201ENST00000362918 102 ntBASIC-1.31□□□□□ -2.62
USF1P22415 RNU6-382P-201ENST00000365181 106 ntBASIC-1.31□□□□□ -2.62
USF1P22415 SNORD58C-201ENST00000365223 64 ntBASIC-1.31□□□□□ -2.62
USF1P22415 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.31□□□□□ -2.62
USF1P22415 RNU6-260P-201ENST00000384092 107 ntBASIC-1.31□□□□□ -2.62
USF1P22415 RNU6-746P-201ENST00000384112 109 ntBASIC-1.31□□□□□ -2.62
USF1P22415 MIR29B1-201ENST00000385015 81 ntBASIC-1.31□□□□□ -2.62
USF1P22415 RNA5SP292-201ENST00000390974 118 ntBASIC-1.31□□□□□ -2.62
USF1P22415 RNU6-62P-201ENST00000516526 102 ntBASIC-1.31□□□□□ -2.62
USF1P22415 MIR4520-1-201ENST00000582609 70 ntBASIC-1.31□□□□□ -2.62
USF1P22415 MIR4439-201ENST00000583746 80 ntBASIC-1.31□□□□□ -2.62
USF1P22415 AC025166.1-201ENST00000612411 163 ntBASIC-1.31□□□□□ -2.62
USF1P22415 MIR6818-201ENST00000621576 65 ntBASIC-1.31□□□□□ -2.62
USF1P22415 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.32□□□□□ -2.62
USF1P22415 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.32□□□□□ -2.62
USF1P22415 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.32□□□□□ -2.62
USF1P22415 MIR1255B2-201ENST00000408618 67 ntBASIC-1.32□□□□□ -2.62
USF1P22415 AL035470.1-201ENST00000622571 220 ntBASIC-1.32□□□□□ -2.62
USF1P22415 RNU6-682P-201ENST00000363843 106 ntBASIC-1.33□□□□□ -2.62
USF1P22415 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.33□□□□□ -2.62
USF1P22415 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.33□□□□□ -2.62
USF1P22415 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
USF1P22415 SNORA26.4-201ENST00000391188 123 ntBASIC-1.33□□□□□ -2.62
USF1P22415 SNORD63.1-201ENST00000516178 80 ntBASIC-1.33□□□□□ -2.62
USF1P22415 MIR548X2-201ENST00000579776 100 ntBASIC-1.33□□□□□ -2.62
USF1P22415 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
USF1P22415 AC103810.7-201ENST00000607821 91 ntBASIC-1.33□□□□□ -2.62
USF1P22415 MIR6502-201ENST00000617296 76 ntBASIC-1.33□□□□□ -2.62
USF1P22415 SNORD115-33-201ENST00000363723 82 ntBASIC-1.34□□□□□ -2.62
USF1P22415 RNU6-824P-201ENST00000363724 104 ntBASIC-1.34□□□□□ -2.62
USF1P22415 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.34□□□□□ -2.62
USF1P22415 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.34□□□□□ -2.62
USF1P22415 RNA5SP147-201ENST00000516493 109 ntBASIC-1.34□□□□□ -2.62
USF1P22415 AC006254.2-201ENST00000603259 279 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms