Protein–RNA interactions for Protein: P13727

PRG2, Bone marrow proteoglycan, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG2P13727 AC244669.1-204ENST00000621564 178 ntBASIC0.57□□□□□ -2.32
PRG2P13727 SNORD45.1-201ENST00000363181 77 ntBASIC0.56□□□□□ -2.32
PRG2P13727 SNORD113.1-201ENST00000363280 73 ntBASIC0.56□□□□□ -2.32
PRG2P13727 SNORD114-26-201ENST00000363543 72 ntBASIC0.56□□□□□ -2.32
PRG2P13727 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
PRG2P13727 RNU6-604P-201ENST00000390917 100 ntBASIC0.56□□□□□ -2.32
PRG2P13727 U3.27-201ENST00000391237 200 ntBASIC0.56□□□□□ -2.32
PRG2P13727 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.56□□□□□ -2.32
PRG2P13727 RNU7-24P-201ENST00000458867 62 ntBASIC0.56□□□□□ -2.32
PRG2P13727 RNU7-104P-201ENST00000459398 79 ntBASIC0.56□□□□□ -2.32
PRG2P13727 RNU7-13P-201ENST00000516413 62 ntBASIC0.56□□□□□ -2.32
PRG2P13727 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
PRG2P13727 MIR4773-1-201ENST00000637203 78 ntBASIC0.56□□□□□ -2.32
PRG2P13727 Y_RNA.174-201ENST00000363781 105 ntBASIC0.55□□□□□ -2.32
PRG2P13727 Y_RNA.205-201ENST00000364128 113 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU6-990P-201ENST00000364385 104 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNY4P3-201ENST00000365254 95 ntBASIC0.55□□□□□ -2.32
PRG2P13727 SNORD115-44-201ENST00000365391 82 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU6-1039P-201ENST00000383931 107 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU6-649P-201ENST00000384463 107 ntBASIC0.55□□□□□ -2.32
PRG2P13727 MIR9-2-201ENST00000384838 87 ntBASIC0.55□□□□□ -2.32
PRG2P13727 MIR154-201ENST00000385243 84 ntBASIC0.55□□□□□ -2.32
PRG2P13727 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU6-663P-201ENST00000391105 106 ntBASIC0.55□□□□□ -2.32
PRG2P13727 SNORD75.2-201ENST00000408784 58 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU6-380P-201ENST00000410207 107 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU6-881P-201ENST00000516813 102 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU1-29P-201ENST00000606574 126 ntBASIC0.55□□□□□ -2.32
PRG2P13727 MIR6779-201ENST00000617283 64 ntBASIC0.55□□□□□ -2.32
PRG2P13727 RNU6-681P-201ENST00000364012 104 ntBASIC0.54□□□□□ -2.32
PRG2P13727 Y_RNA.340-201ENST00000365330 92 ntBASIC0.54□□□□□ -2.32
PRG2P13727 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
PRG2P13727 RNU6V-201ENST00000384105 107 ntBASIC0.54□□□□□ -2.32
PRG2P13727 MIR203A-201ENST00000384836 110 ntBASIC0.54□□□□□ -2.32
PRG2P13727 MIR573-201ENST00000384964 99 ntBASIC0.54□□□□□ -2.32
PRG2P13727 RNU6-269P-201ENST00000391077 97 ntBASIC0.54□□□□□ -2.32
PRG2P13727 SNORD30.1-201ENST00000391309 70 ntBASIC0.54□□□□□ -2.32
PRG2P13727 AC244098.3-201ENST00000424803 96 ntBASIC0.54□□□□□ -2.32
PRG2P13727 RNU6-871P-201ENST00000516122 100 ntBASIC0.54□□□□□ -2.32
PRG2P13727 MIR3678-201ENST00000578455 94 ntBASIC0.54□□□□□ -2.32
PRG2P13727 MIR3612-201ENST00000579753 87 ntBASIC0.54□□□□□ -2.32
PRG2P13727 MIR6828-201ENST00000636181 60 ntBASIC0.54□□□□□ -2.32
PRG2P13727 RNU6-471P-201ENST00000383944 106 ntBASIC0.53□□□□□ -2.32
PRG2P13727 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
PRG2P13727 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
PRG2P13727 Y_RNA.443-201ENST00000384135 111 ntBASIC0.53□□□□□ -2.32
PRG2P13727 MT-TY-201ENST00000387409 66 ntBASIC0.53□□□□□ -2.32
PRG2P13727 MIR4714-201ENST00000580728 77 ntBASIC0.53□□□□□ -2.32
PRG2P13727 MIR4639-201ENST00000584938 69 ntBASIC0.53□□□□□ -2.32
PRG2P13727 AC067863.3-201ENST00000624172 122 ntBASIC0.53□□□□□ -2.32
PRG2P13727 RNU1-141P-201ENST00000364623 158 ntBASIC0.52□□□□□ -2.33
PRG2P13727 RNU6-630P-201ENST00000391258 106 ntBASIC0.52□□□□□ -2.33
PRG2P13727 RNA5SP484-201ENST00000458857 111 ntBASIC0.52□□□□□ -2.33
PRG2P13727 MIR3657-201ENST00000584818 117 ntBASIC0.52□□□□□ -2.33
PRG2P13727 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
PRG2P13727 AL162376.1-201ENST00000624117 175 ntBASIC0.52□□□□□ -2.33
PRG2P13727 MIR18A-201ENST00000362310 71 ntBASIC0.51□□□□□ -2.33
PRG2P13727 RNU6-716P-201ENST00000365621 103 ntBASIC0.51□□□□□ -2.33
PRG2P13727 MIR216A-201ENST00000385063 110 ntBASIC0.51□□□□□ -2.33
PRG2P13727 RNU5B-6P-201ENST00000516765 68 ntBASIC0.51□□□□□ -2.33
PRG2P13727 RNU6-656P-201ENST00000516785 107 ntBASIC0.51□□□□□ -2.33
PRG2P13727 MIR548AE1-201ENST00000583292 70 ntBASIC0.51□□□□□ -2.33
PRG2P13727 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
PRG2P13727 RNU6-1216P-201ENST00000362590 107 ntBASIC0.5□□□□□ -2.33
PRG2P13727 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
PRG2P13727 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
PRG2P13727 RNA5SP117-201ENST00000365294 118 ntBASIC0.5□□□□□ -2.33
PRG2P13727 MIR582-201ENST00000365731 98 ntBASIC0.5□□□□□ -2.33
PRG2P13727 RNU6-274P-201ENST00000459566 107 ntBASIC0.5□□□□□ -2.33
PRG2P13727 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.5□□□□□ -2.33
PRG2P13727 RNU6-752P-201ENST00000516376 102 ntBASIC0.5□□□□□ -2.33
PRG2P13727 SCARNA16.5-201ENST00000517114 183 ntBASIC0.5□□□□□ -2.33
PRG2P13727 RN7SL793P-201ENST00000583259 296 ntBASIC0.5□□□□□ -2.33
PRG2P13727 MIR6509-201ENST00000614603 85 ntBASIC0.5□□□□□ -2.33
PRG2P13727 AC073869.9-201ENST00000641610 120 ntBASIC0.5□□□□□ -2.33
PRG2P13727 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
PRG2P13727 RNU6-260P-201ENST00000384092 107 ntBASIC0.49□□□□□ -2.33
PRG2P13727 SNORA8.2-201ENST00000384372 139 ntBASIC0.49□□□□□ -2.33
PRG2P13727 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
PRG2P13727 AL691482.2-201ENST00000457453 84 ntBASIC0.49□□□□□ -2.33
PRG2P13727 Y_RNA.633-201ENST00000459107 95 ntBASIC0.49□□□□□ -2.33
PRG2P13727 AC125388.1-201ENST00000459631 156 ntBASIC0.49□□□□□ -2.33
PRG2P13727 MIR4752-201ENST00000579672 72 ntBASIC0.49□□□□□ -2.33
PRG2P13727 MIR4511-201ENST00000582784 87 ntBASIC0.49□□□□□ -2.33
PRG2P13727 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
PRG2P13727 SNORA70.25-201ENST00000612741 95 ntBASIC0.49□□□□□ -2.33
PRG2P13727 MIR8053-201ENST00000613344 75 ntBASIC0.49□□□□□ -2.33
PRG2P13727 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
PRG2P13727 SNORA25.4-201ENST00000363666 124 ntBASIC0.48□□□□□ -2.33
PRG2P13727 RNU6-645P-201ENST00000364649 106 ntBASIC0.48□□□□□ -2.33
PRG2P13727 AC110620.1-201ENST00000416042 228 ntBASIC0.48□□□□□ -2.33
PRG2P13727 snoU13.13-201ENST00000458842 104 ntBASIC0.48□□□□□ -2.33
PRG2P13727 RNA5SP147-201ENST00000516493 109 ntBASIC0.48□□□□□ -2.33
PRG2P13727 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
PRG2P13727 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
PRG2P13727 Y_RNA.375-201ENST00000365625 101 ntBASIC0.47□□□□□ -2.33
PRG2P13727 RNU6-1232P-201ENST00000516299 86 ntBASIC0.47□□□□□ -2.33
PRG2P13727 MIR4460-201ENST00000577862 86 ntBASIC0.47□□□□□ -2.33
PRG2P13727 MIR6513-201ENST00000621188 64 ntBASIC0.47□□□□□ -2.33
PRG2P13727 MIR6739-201ENST00000622461 75 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms