Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR4460-201ENST00000577862 86 ntBASIC1.34□□□□□ -2.19
RARAP10276 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
RARAP10276 MIR6788-201ENST00000618842 66 ntBASIC1.34□□□□□ -2.19
RARAP10276 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
RARAP10276 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RARAP10276 RNU1-141P-201ENST00000364623 158 ntBASIC1.33□□□□□ -2.2
RARAP10276 RNU6-269P-201ENST00000391077 97 ntBASIC1.33□□□□□ -2.2
RARAP10276 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
RARAP10276 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
RARAP10276 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
RARAP10276 MIR520E-201ENST00000384867 87 ntBASIC1.32□□□□□ -2.2
RARAP10276 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
RARAP10276 RNA5SP436-201ENST00000516020 115 ntBASIC1.32□□□□□ -2.2
RARAP10276 RNU6-982P-201ENST00000516216 102 ntBASIC1.32□□□□□ -2.2
RARAP10276 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.32□□□□□ -2.2
RARAP10276 MIR3657-201ENST00000584818 117 ntBASIC1.32□□□□□ -2.2
RARAP10276 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RARAP10276 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
RARAP10276 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RARAP10276 SNORA8.2-201ENST00000384372 139 ntBASIC1.31□□□□□ -2.2
RARAP10276 MIR548J-201ENST00000408833 112 ntBASIC1.31□□□□□ -2.2
RARAP10276 MIR6828-201ENST00000636181 60 ntBASIC1.31□□□□□ -2.2
RARAP10276 AC073869.9-201ENST00000641610 120 ntBASIC1.31□□□□□ -2.2
RARAP10276 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RARAP10276 MIR18A-201ENST00000362310 71 ntBASIC1.3□□□□□ -2.2
RARAP10276 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
RARAP10276 SNORD99-201ENST00000408612 74 ntBASIC1.3□□□□□ -2.2
RARAP10276 AC011195.1-201ENST00000578177 177 ntBASIC1.3□□□□□ -2.2
RARAP10276 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RARAP10276 RNU6-260P-201ENST00000384092 107 ntBASIC1.29□□□□□ -2.2
RARAP10276 AL162376.1-201ENST00000624117 175 ntBASIC1.29□□□□□ -2.2
RARAP10276 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
RARAP10276 RNA5SP484-201ENST00000458857 111 ntBASIC1.28□□□□□ -2.2
RARAP10276 AL590095.2-201ENST00000604136 117 ntBASIC1.28□□□□□ -2.2
RARAP10276 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
RARAP10276 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
RARAP10276 SNORA40.17-201ENST00000517256 115 ntBASIC1.27□□□□□ -2.21
RARAP10276 AL109933.3-201ENST00000619095 188 ntBASIC1.27□□□□□ -2.21
RARAP10276 SNORA2.1-201ENST00000363089 137 ntBASIC1.26□□□□□ -2.21
RARAP10276 SNORA36.1-201ENST00000363424 132 ntBASIC1.26□□□□□ -2.21
RARAP10276 RNU6-990P-201ENST00000364385 104 ntBASIC1.26□□□□□ -2.21
RARAP10276 RNA5SP121-201ENST00000516537 101 ntBASIC1.26□□□□□ -2.21
RARAP10276 RNU5B-6P-201ENST00000516765 68 ntBASIC1.26□□□□□ -2.21
RARAP10276 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RARAP10276 MTND4LP1-201ENST00000446263 157 ntBASIC1.25□□□□□ -2.21
RARAP10276 RNA5SP227-201ENST00000516184 113 ntBASIC1.25□□□□□ -2.21
RARAP10276 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.25□□□□□ -2.21
RARAP10276 AC069503.3-201ENST00000618674 145 ntBASIC1.25□□□□□ -2.21
RARAP10276 RNU4-45P-201ENST00000365469 141 ntBASIC1.24□□□□□ -2.21
RARAP10276 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.24□□□□□ -2.21
RARAP10276 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.24□□□□□ -2.21
RARAP10276 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
RARAP10276 RNU6-645P-201ENST00000364649 106 ntBASIC1.23□□□□□ -2.21
RARAP10276 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
RARAP10276 RNA5SP268-201ENST00000516828 124 ntBASIC1.23□□□□□ -2.21
RARAP10276 RNA5SP94-201ENST00000516917 108 ntBASIC1.23□□□□□ -2.21
RARAP10276 AC018659.1-201ENST00000551083 169 ntBASIC1.23□□□□□ -2.21
RARAP10276 MIR4511-201ENST00000582784 87 ntBASIC1.23□□□□□ -2.21
RARAP10276 AC103706.3-201ENST00000636297 85 ntBASIC1.23□□□□□ -2.21
RARAP10276 MIR924-201ENST00000638017 53 ntBASIC1.23□□□□□ -2.21
RARAP10276 RNU6-668P-201ENST00000364180 107 ntBASIC1.22□□□□□ -2.21
RARAP10276 RNU6-1187P-201ENST00000364771 110 ntBASIC1.22□□□□□ -2.21
RARAP10276 MIR9-2-201ENST00000384838 87 ntBASIC1.22□□□□□ -2.21
RARAP10276 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
RARAP10276 RNA5SP147-201ENST00000516493 109 ntBASIC1.22□□□□□ -2.21
RARAP10276 SNORD114-4-201ENST00000363962 75 ntBASIC1.21□□□□□ -2.22
RARAP10276 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.21□□□□□ -2.22
RARAP10276 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
RARAP10276 RNA5SP330-201ENST00000517096 96 ntBASIC1.2□□□□□ -2.22
RARAP10276 MIR7107-201ENST00000611489 80 ntBASIC1.2□□□□□ -2.22
RARAP10276 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
RARAP10276 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
RARAP10276 AL353765.1-201ENST00000605514 183 ntBASIC1.19□□□□□ -2.22
RARAP10276 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.19□□□□□ -2.22
RARAP10276 RNA5SP222-201ENST00000411039 105 ntBASIC1.18□□□□□ -2.22
RARAP10276 MIR6739-201ENST00000622461 75 ntBASIC1.18□□□□□ -2.22
RARAP10276 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RARAP10276 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
RARAP10276 RNA5SP331-201ENST00000364986 107 ntBASIC1.17□□□□□ -2.22
RARAP10276 AC006210.1-201ENST00000424882 111 ntBASIC1.17□□□□□ -2.22
RARAP10276 RNU6-656P-201ENST00000516785 107 ntBASIC1.17□□□□□ -2.22
RARAP10276 Y_RNA.375-201ENST00000365625 101 ntBASIC1.16□□□□□ -2.22
RARAP10276 RNU6-30P-201ENST00000384561 107 ntBASIC1.16□□□□□ -2.22
RARAP10276 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.16□□□□□ -2.22
RARAP10276 Y_RNA.250-201ENST00000364542 110 ntBASIC1.15□□□□□ -2.23
RARAP10276 VTRNA1-3-201ENST00000365645 89 ntBASIC1.15□□□□□ -2.23
RARAP10276 Y_RNA.407-201ENST00000383986 113 ntBASIC1.15□□□□□ -2.23
RARAP10276 SNORD110-201ENST00000408189 75 ntBASIC1.14□□□□□ -2.23
RARAP10276 MIR5000-201ENST00000577717 103 ntBASIC1.14□□□□□ -2.23
RARAP10276 AC110620.1-201ENST00000416042 228 ntBASIC1.13□□□□□ -2.23
RARAP10276 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.13□□□□□ -2.23
RARAP10276 RNU6-542P-201ENST00000516405 103 ntBASIC1.13□□□□□ -2.23
RARAP10276 MIR548AE1-201ENST00000583292 70 ntBASIC1.13□□□□□ -2.23
RARAP10276 MIR4473-201ENST00000583731 91 ntBASIC1.13□□□□□ -2.23
RARAP10276 RNU6-669P-201ENST00000365575 107 ntBASIC1.12□□□□□ -2.23
RARAP10276 RNY1P8-201ENST00000383970 114 ntBASIC1.12□□□□□ -2.23
RARAP10276 MIR652-201ENST00000385278 98 ntBASIC1.12□□□□□ -2.23
RARAP10276 snoU13.13-201ENST00000458842 104 ntBASIC1.12□□□□□ -2.23
RARAP10276 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
RARAP10276 SCARNA17.3-201ENST00000516381 125 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms