Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.79□□□□□ -2.54
COL4A2P08572 MIR4679-2-201ENST00000578358 77 ntBASIC-0.79□□□□□ -2.54
COL4A2P08572 MIR4439-201ENST00000583746 80 ntBASIC-0.79□□□□□ -2.54
COL4A2P08572 AC025166.1-201ENST00000612411 163 ntBASIC-0.79□□□□□ -2.54
COL4A2P08572 RNU6-832P-201ENST00000363319 107 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 RNU6-905P-201ENST00000384434 107 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 RNU6-816P-201ENST00000390914 107 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.8□□□□□ -2.54
COL4A2P08572 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.8□□□□□ -2.54
COL4A2P08572 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 SNORA63.2-201ENST00000362603 126 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 SNORA62.4-201ENST00000365504 151 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.81□□□□□ -2.54
COL4A2P08572 MIR5704-201ENST00000584029 77 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 SNORD115-23-201ENST00000364461 82 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 RNU6-394P-201ENST00000410735 107 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL4A2P08572 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 MIR4770-201ENST00000579149 58 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 MIR4503-201ENST00000582187 83 ntBASIC-0.81□□□□□ -2.54
COL4A2P08572 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 MIR582-201ENST00000365731 98 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 RNU6-196P-201ENST00000384315 107 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 RNU7-85P-201ENST00000458851 63 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 MIR5591-201ENST00000578248 65 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 AC025521.1-201ENST00000621624 286 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 MIR1246-201ENST00000636535 73 ntBASIC-0.82□□□□□ -2.54
COL4A2P08572 RNU6-682P-201ENST00000363843 106 ntBASIC-0.83□□□□□ -2.54
COL4A2P08572 MIR548U-201ENST00000390728 81 ntBASIC-0.83□□□□□ -2.54
COL4A2P08572 RNU6-592P-201ENST00000411333 103 ntBASIC-0.83□□□□□ -2.54
COL4A2P08572 AL158147.1-201ENST00000443970 75 ntBASIC-0.83□□□□□ -2.54
COL4A2P08572 AL513043.2-201ENST00000573941 143 ntBASIC-0.83□□□□□ -2.54
COL4A2P08572 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 HLA-S-202ENST00000425174 53 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 AC097510.1-201ENST00000510945 133 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 FGF7P7-201ENST00000514120 227 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 snoU83B.1-201ENST00000517136 88 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 MIR548X2-201ENST00000579776 100 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 MTATP6P29-201ENST00000415057 132 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 RNU6-781P-201ENST00000516377 101 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 RNU6-62P-201ENST00000516526 102 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 U7.2-201ENST00000607576 63 ntBASIC-0.84□□□□□ -2.54
COL4A2P08572 SNORD114-17-201ENST00000364699 75 ntBASIC-0.85□□□□□ -2.55
COL4A2P08572 MIR124-2-201ENST00000385081 109 ntBASIC-0.85□□□□□ -2.55
COL4A2P08572 AC068339.1-201ENST00000526965 141 ntBASIC-0.85□□□□□ -2.55
COL4A2P08572 MIR4694-201ENST00000578534 80 ntBASIC-0.85□□□□□ -2.55
COL4A2P08572 MIR548Z-201ENST00000584743 97 ntBASIC-0.85□□□□□ -2.55
COL4A2P08572 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.85□□□□□ -2.55
COL4A2P08572 RNU6-208P-201ENST00000362431 107 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 RNU6-132P-201ENST00000383863 107 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 RNU6-260P-201ENST00000384092 107 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 SNORA24B-201ENST00000384176 131 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 MIR147A-201ENST00000385079 72 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 RNU6-644P-201ENST00000391155 98 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 SNORD4B-201ENST00000459083 72 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 AC004792.1-201ENST00000614523 137 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 SNORD45B-201ENST00000364617 72 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 SNORD75.2-201ENST00000408784 58 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 AC138207.3-201ENST00000585289 166 ntBASIC-0.86□□□□□ -2.55
COL4A2P08572 RNU6-379P-201ENST00000363813 104 ntBASIC-0.87□□□□□ -2.55
COL4A2P08572 SNORA63.6-201ENST00000364921 119 ntBASIC-0.87□□□□□ -2.55
COL4A2P08572 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.87□□□□□ -2.55
COL4A2P08572 MTND3P2-201ENST00000438452 342 ntBASIC-0.87□□□□□ -2.55
COL4A2P08572 MIR3613-201ENST00000579844 87 ntBASIC-0.87□□□□□ -2.55
COL4A2P08572 MIR3140-201ENST00000583685 90 ntBASIC-0.87□□□□□ -2.55
COL4A2P08572 U6.96-201ENST00000636425 70 ntBASIC-0.87□□□□□ -2.55
COL4A2P08572 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.88□□□□□ -2.55
COL4A2P08572 MIR527-201ENST00000385244 85 ntBASIC-0.88□□□□□ -2.55
COL4A2P08572 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
COL4A2P08572 CYP3A54P-201ENST00000566950 75 ntBASIC-0.88□□□□□ -2.55
COL4A2P08572 RNU6-574P-201ENST00000384265 107 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 MIR6129-201ENST00000616087 109 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.89□□□□□ -2.55
COL4A2P08572 RNY3P2-201ENST00000362918 102 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 RNU6-200P-201ENST00000364743 107 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 MIR3144-201ENST00000579460 79 ntBASIC-0.89□□□□□ -2.55
COL4A2P08572 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.9□□□□□ -2.55
COL4A2P08572 SNORD58C-201ENST00000365223 64 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms