Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 SNORA24B-201ENST00000384176 131 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 AC138207.3-201ENST00000585289 166 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 AC104996.3-201ENST00000590718 94 ntBASIC-1.48□□□□□ -2.65
UPK1BO75841 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.48□□□□□ -2.65
UPK1BO75841 SNORD58C-201ENST00000365223 64 ntBASIC-1.49□□□□□ -2.65
UPK1BO75841 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.49□□□□□ -2.65
UPK1BO75841 SNORD116-18-201ENST00000383961 92 ntBASIC-1.49□□□□□ -2.65
UPK1BO75841 SNORD75.2-201ENST00000408784 58 ntBASIC-1.49□□□□□ -2.65
UPK1BO75841 RNA5SP461-201ENST00000516451 104 ntBASIC-1.49□□□□□ -2.65
UPK1BO75841 AL353803.5-201ENST00000599815 141 ntBASIC-1.49□□□□□ -2.65
UPK1BO75841 U7.2-201ENST00000607576 63 ntBASIC-1.49□□□□□ -2.65
UPK1BO75841 MIR8485-201ENST00000401372 91 ntBASIC-1.5□□□□□ -2.65
UPK1BO75841 RNA5SP476-201ENST00000516613 103 ntBASIC-1.5□□□□□ -2.65
UPK1BO75841 MIR3613-201ENST00000579844 87 ntBASIC-1.5□□□□□ -2.65
UPK1BO75841 MIR4464-201ENST00000580818 92 ntBASIC-1.5□□□□□ -2.65
UPK1BO75841 RNY3P2-201ENST00000362918 102 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 MIR548A1-201ENST00000385041 97 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 RNU7-24P-201ENST00000458867 62 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 RNU7-120P-201ENST00000459334 63 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 MIR548X2-201ENST00000579776 100 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 AC103810.7-201ENST00000607821 91 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 AC132825.6-201ENST00000638861 357 ntBASIC-1.51□□□□□ -2.65
UPK1BO75841 SNORD90-201ENST00000391145 111 ntBASIC-1.52□□□□□ -2.65
UPK1BO75841 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.52□□□□□ -2.65
UPK1BO75841 SNORD4B-201ENST00000459083 72 ntBASIC-1.52□□□□□ -2.65
UPK1BO75841 AL035470.1-201ENST00000622571 220 ntBASIC-1.52□□□□□ -2.65
UPK1BO75841 RNU6-644P-201ENST00000391155 98 ntBASIC-1.53□□□□□ -2.65
UPK1BO75841 RNU7-134P-201ENST00000458997 64 ntBASIC-1.53□□□□□ -2.65
UPK1BO75841 MIR5591-201ENST00000578248 65 ntBASIC-1.53□□□□□ -2.65
UPK1BO75841 RNA5SP292-201ENST00000390974 118 ntBASIC-1.54□□□□□ -2.66
UPK1BO75841 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.54□□□□□ -2.66
UPK1BO75841 RNU6-479P-201ENST00000516348 105 ntBASIC-1.54□□□□□ -2.66
UPK1BO75841 RNA5SP147-201ENST00000516493 109 ntBASIC-1.54□□□□□ -2.66
UPK1BO75841 MIR548Z-201ENST00000584743 97 ntBASIC-1.54□□□□□ -2.66
UPK1BO75841 MIR6888-201ENST00000621977 67 ntBASIC-1.54□□□□□ -2.66
UPK1BO75841 RNU6-226P-201ENST00000363778 107 ntBASIC-1.55□□□□□ -2.66
UPK1BO75841 MTND3P2-201ENST00000438452 342 ntBASIC-1.55□□□□□ -2.66
UPK1BO75841 MIR4503-201ENST00000582187 83 ntBASIC-1.55□□□□□ -2.66
UPK1BO75841 AL445584.3-201ENST00000617173 78 ntBASIC-1.55□□□□□ -2.66
UPK1BO75841 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 RNU6-382P-201ENST00000365181 106 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 MIR203A-201ENST00000384836 110 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 snoU13.17-201ENST00000458802 104 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 RNA5SP272-201ENST00000516095 111 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 MIR4439-201ENST00000583746 80 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 MIR6129-201ENST00000616087 109 ntBASIC-1.56□□□□□ -2.66
UPK1BO75841 MIR409-201ENST00000362237 79 ntBASIC-1.57□□□□□ -2.66
UPK1BO75841 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.57□□□□□ -2.66
UPK1BO75841 SNORD45B-201ENST00000364617 72 ntBASIC-1.57□□□□□ -2.66
UPK1BO75841 RNU6-813P-201ENST00000384691 107 ntBASIC-1.57□□□□□ -2.66
UPK1BO75841 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.57□□□□□ -2.66
UPK1BO75841 RNU6-327P-201ENST00000516270 127 ntBASIC-1.57□□□□□ -2.66
UPK1BO75841 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 SNORA33.1-201ENST00000364957 130 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 RNU6-260P-201ENST00000384092 107 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 MIR569-201ENST00000385228 96 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 RNU6-519P-201ENST00000410590 108 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 HAR1A.1-201ENST00000459583 118 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 SNORA18.5-201ENST00000516616 101 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 AC006254.2-201ENST00000603259 279 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 MIR4773-1-201ENST00000637203 78 ntBASIC-1.58□□□□□ -2.66
UPK1BO75841 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.59□□□□□ -2.66
UPK1BO75841 RNU6-574P-201ENST00000384265 107 ntBASIC-1.59□□□□□ -2.66
UPK1BO75841 RNU6-804P-201ENST00000384286 107 ntBASIC-1.59□□□□□ -2.66
UPK1BO75841 MIR1255B2-201ENST00000408618 67 ntBASIC-1.59□□□□□ -2.66
UPK1BO75841 RNU6-394P-201ENST00000410735 107 ntBASIC-1.59□□□□□ -2.66
UPK1BO75841 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.6□□□□□ -2.67
UPK1BO75841 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.6□□□□□ -2.67
UPK1BO75841 MTATP6P29-201ENST00000415057 132 ntBASIC-1.6□□□□□ -2.67
UPK1BO75841 RNU6-62P-201ENST00000516526 102 ntBASIC-1.6□□□□□ -2.67
UPK1BO75841 MIR4679-2-201ENST00000578358 77 ntBASIC-1.6□□□□□ -2.67
UPK1BO75841 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.61□□□□□ -2.67
UPK1BO75841 RNU6-196P-201ENST00000384315 107 ntBASIC-1.61□□□□□ -2.67
UPK1BO75841 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.61□□□□□ -2.67
UPK1BO75841 MIR889-201ENST00000401280 79 ntBASIC-1.61□□□□□ -2.67
UPK1BO75841 MIR4770-201ENST00000579149 58 ntBASIC-1.61□□□□□ -2.67
UPK1BO75841 MIR6509-201ENST00000614603 85 ntBASIC-1.61□□□□□ -2.67
UPK1BO75841 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.62□□□□□ -2.67
UPK1BO75841 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.62□□□□□ -2.67
UPK1BO75841 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.62□□□□□ -2.67
UPK1BO75841 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
UPK1BO75841 MIR548I1-201ENST00000408810 149 ntBASIC-1.62□□□□□ -2.67
UPK1BO75841 RNA5SP180-201ENST00000516181 101 ntBASIC-1.62□□□□□ -2.67
UPK1BO75841 RNU6-824P-201ENST00000363724 104 ntBASIC-1.63□□□□□ -2.67
UPK1BO75841 RNU6-200P-201ENST00000364743 107 ntBASIC-1.63□□□□□ -2.67
UPK1BO75841 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.63□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 421.3 ms