Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
SMAD6O43541 MIR3675-201ENST00000583661 73 ntBASIC0.69□□□□□ -2.3
SMAD6O43541 MIR548O2-201ENST00000616090 70 ntBASIC0.69□□□□□ -2.3
SMAD6O43541 MIR6828-201ENST00000636181 60 ntBASIC0.69□□□□□ -2.3
SMAD6O43541 SNORD45.1-201ENST00000363181 77 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 Y_RNA.118-201ENST00000363300 101 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 MIR203A-201ENST00000384836 110 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 MIR489-201ENST00000384923 84 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 MIR216B-201ENST00000390186 82 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU6-604P-201ENST00000390917 100 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU6-269P-201ENST00000391077 97 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 AC093423.1-201ENST00000440817 142 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNU7-74P-201ENST00000459104 62 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNA5SP227-201ENST00000516184 113 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 RNA5SP94-201ENST00000516917 108 ntBASIC0.68□□□□□ -2.3
SMAD6O43541 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SMAD6O43541 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SMAD6O43541 RNU6-495P-201ENST00000362995 107 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 RNU6-681P-201ENST00000364012 104 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 RNU4-45P-201ENST00000365469 141 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 RNU6V-201ENST00000384105 107 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 SNORD116-24-201ENST00000384549 92 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 SNORD30.1-201ENST00000391309 70 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 AL109933.3-201ENST00000619095 188 ntBASIC0.67□□□□□ -2.3
SMAD6O43541 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
SMAD6O43541 RNU1-141P-201ENST00000364623 158 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-590P-201ENST00000365039 107 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-649P-201ENST00000384463 107 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-663P-201ENST00000391105 106 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 SNORD75.2-201ENST00000408784 58 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-871P-201ENST00000516122 100 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-982P-201ENST00000516216 102 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNA5SP268-201ENST00000516828 124 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 AL162376.1-201ENST00000624117 175 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 U6.111-201ENST00000636093 83 ntBASIC0.66□□□□□ -2.3
SMAD6O43541 RNU6-990P-201ENST00000364385 104 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 RNU6-1039P-201ENST00000383931 107 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 SNORA8.2-201ENST00000384372 139 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 RNA5SP484-201ENST00000458857 111 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 RNU6-274P-201ENST00000459566 107 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR4460-201ENST00000577862 86 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 AC005520.4-201ENST00000604337 90 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR7107-201ENST00000611489 80 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR7111-201ENST00000619751 72 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 MIR6515-201ENST00000619843 57 ntBASIC0.65□□□□□ -2.31
SMAD6O43541 SNORD113.1-201ENST00000363280 73 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 RNU6-800P-201ENST00000384473 103 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 MT-TY-201ENST00000387409 66 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
SMAD6O43541 RNU7-24P-201ENST00000458867 62 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 RNU6-881P-201ENST00000516813 102 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
SMAD6O43541 Y_RNA.340-201ENST00000365330 92 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 AL691482.2-201ENST00000457453 84 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 MIR6509-201ENST00000614603 85 ntBASIC0.63□□□□□ -2.31
SMAD6O43541 RNA5SP517-201ENST00000364724 117 ntBASIC0.62□□□□□ -2.31
SMAD6O43541 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
SMAD6O43541 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.62□□□□□ -2.31
SMAD6O43541 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNU6-630P-201ENST00000391258 106 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNU6-752P-201ENST00000516376 102 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNA5SP147-201ENST00000516493 109 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 MIR4752-201ENST00000579672 72 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 MIR3657-201ENST00000584818 117 ntBASIC0.61□□□□□ -2.31
SMAD6O43541 Y_RNA.205-201ENST00000364128 113 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 Y_RNA.443-201ENST00000384135 111 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 MIR9-2-201ENST00000384838 87 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 MIR548AE1-201ENST00000583292 70 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 AC069503.3-201ENST00000618674 145 ntBASIC0.6□□□□□ -2.31
SMAD6O43541 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.59□□□□□ -2.31
SMAD6O43541 RNU6-1216P-201ENST00000362590 107 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 RNU6-895P-201ENST00000384125 103 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 snoU13.13-201ENST00000458842 104 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 RNU1-29P-201ENST00000606574 126 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 SNORA25.18-201ENST00000607153 114 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 SNORA70.25-201ENST00000612741 95 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 MIR8053-201ENST00000613344 75 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 AC073869.9-201ENST00000641610 120 ntBASIC0.59□□□□□ -2.31
SMAD6O43541 RNU6-260P-201ENST00000384092 107 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC006210.1-201ENST00000424882 111 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC125388.1-201ENST00000459631 156 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 MIR6513-201ENST00000621188 64 ntBASIC0.58□□□□□ -2.32
SMAD6O43541 RNU6-471P-201ENST00000383944 106 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 SNORD110-201ENST00000408189 75 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 AC069271.1-201ENST00000445577 156 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 PVT1_3.1-201ENST00000620853 95 ntBASIC0.57□□□□□ -2.32
SMAD6O43541 RNU6-645P-201ENST00000364649 106 ntBASIC0.56□□□□□ -2.32
SMAD6O43541 MIR582-201ENST00000365731 98 ntBASIC0.56□□□□□ -2.32
SMAD6O43541 RNU6-656P-201ENST00000516785 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms